Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 SLC7A5P1-201ENST00000568957 537 ntBASIC18.11■□□□□ 0.49
CDH20Q9HBT6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 IKBKGP1-201ENST00000612193 1073 ntBASIC18.11■□□□□ 0.49
CDH20Q9HBT6 BID-214ENST00000617586 542 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH20Q9HBT6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.09■□□□□ 0.49
CDH20Q9HBT6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDH20Q9HBT6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CDH20Q9HBT6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.08■□□□□ 0.49
CDH20Q9HBT6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.08■□□□□ 0.49
CDH20Q9HBT6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 AC004911.1-201ENST00000416316 871 ntBASIC18.08■□□□□ 0.48
CDH20Q9HBT6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 AC011767.1-201ENST00000617410 1153 ntBASIC18.08■□□□□ 0.48
CDH20Q9HBT6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.08■□□□□ 0.48
CDH20Q9HBT6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDH20Q9HBT6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.06■□□□□ 0.48
CDH20Q9HBT6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms