Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 BRE5YNR051C 1548 nt3.22□□□□□ -1.89
RPN11P43588 ARG2YJL071W 1725 nt3.22□□□□□ -1.89
RPN11P43588 MPS1YDL028C 2295 nt3.21□□□□□ -1.9
RPN11P43588 RVS161YCR009C 798 nt3.21□□□□□ -1.9
RPN11P43588 GPI8YDR331W 1236 nt3.21□□□□□ -1.9
RPN11P43588 MTC7YEL033W 420 nt3.21□□□□□ -1.9
RPN11P43588 RTT105YER104W 627 nt3.21□□□□□ -1.9
RPN11P43588 FAR7YFR008W 666 nt3.21□□□□□ -1.9
RPN11P43588 LIF1YGL090W 1266 nt3.21□□□□□ -1.9
RPN11P43588 SYS1YJL004C 612 nt3.21□□□□□ -1.9
RPN11P43588 RPS21BYJL136C 264 nt3.21□□□□□ -1.9
RPN11P43588 YJR157WYJR157W 363 nt3.21□□□□□ -1.9
RPN11P43588 ARC18YLR370C 537 nt3.21□□□□□ -1.9
RPN11P43588 ATP18YML081C-A 180 nt3.21□□□□□ -1.9
RPN11P43588 SWS2YNL081C 432 nt3.21□□□□□ -1.9
RPN11P43588 ATP19YOL077W-A 207 nt3.21□□□□□ -1.9
RPN11P43588 YOL114CYOL114C 609 nt3.21□□□□□ -1.9
RPN11P43588 YPR053CYPR053C 456 nt3.21□□□□□ -1.9
RPN11P43588 AFR1YDR085C 1863 nt3.21□□□□□ -1.9
RPN11P43588 NEL1YHR035W 1893 nt3.21□□□□□ -1.9
RPN11P43588 PEX5YDR244W 1839 nt3.21□□□□□ -1.9
RPN11P43588 ERG11YHR007C 1593 nt3.21□□□□□ -1.9
RPN11P43588 HRD1YOL013C 1656 nt3.2□□□□□ -1.9
RPN11P43588 SIZ1YDR409W 2715 nt3.2□□□□□ -1.9
RPN11P43588 YGR228WYGR228W 345 nt3.2□□□□□ -1.9
RPN11P43588 YIL029CYIL029C 429 nt3.2□□□□□ -1.9
RPN11P43588 ILM1YJR118C 612 nt3.2□□□□□ -1.9
RPN11P43588 RUF22RUF22 515 nt3.2□□□□□ -1.9
RPN11P43588 YNL150WYNL150W 408 nt3.2□□□□□ -1.9
RPN11P43588 LDS2YOL047C 1071 nt3.2□□□□□ -1.9
RPN11P43588 YBR051WYBR051W 351 nt3.2□□□□□ -1.9
RPN11P43588 YDR179W-AYDR179W-A 1392 nt3.2□□□□□ -1.9
RPN11P43588 YKL075CYKL075C 1353 nt3.2□□□□□ -1.9
RPN11P43588 GYP7YDL234C 2241 nt3.2□□□□□ -1.9
RPN11P43588 TIF4631YGR162W 2859 nt3.2□□□□□ -1.9
RPN11P43588 BYE1YKL005C 1785 nt3.2□□□□□ -1.9
RPN11P43588 APL5YPL195W 2799 nt3.19□□□□□ -1.9
RPN11P43588 DRS2YAL026C 4068 nt3.19□□□□□ -1.9
RPN11P43588 ZDS2YML109W 2829 nt3.19□□□□□ -1.9
RPN11P43588 YCR045W-AYCR045W-A 351 nt3.19□□□□□ -1.9
RPN11P43588 YFR054CYFR054C 579 nt3.19□□□□□ -1.9
RPN11P43588 RPL1BYGL135W 654 nt3.19□□□□□ -1.9
RPN11P43588 RPL11BYGR085C 525 nt3.19□□□□□ -1.9
RPN11P43588 BET4YJL031C 984 nt3.19□□□□□ -1.9
RPN11P43588 LSM1YJL124C 519 nt3.19□□□□□ -1.9
RPN11P43588 YOL013W-BYOL013W-B 291 nt3.19□□□□□ -1.9
RPN11P43588 YOR385WYOR385W 873 nt3.19□□□□□ -1.9
RPN11P43588 RPL1AYPL220W 654 nt3.19□□□□□ -1.9
RPN11P43588 RPL11AYPR102C 525 nt3.19□□□□□ -1.9
RPN11P43588 SCD6YPR129W 1050 nt3.19□□□□□ -1.9
RPN11P43588 UBP15YMR304W 3693 nt3.18□□□□□ -1.9
RPN11P43588 PHO81YGR233C 3537 nt3.18□□□□□ -1.9
RPN11P43588 ADY4YLR227C 1482 nt3.18□□□□□ -1.9
RPN11P43588 AVT5YBL089W 1380 nt3.18□□□□□ -1.9
RPN11P43588 PEX6YNL329C 3093 nt3.18□□□□□ -1.9
RPN11P43588 YDL187CYDL187C 330 nt3.18□□□□□ -1.9
RPN11P43588 GPI19YDR437W 423 nt3.18□□□□□ -1.9
RPN11P43588 MIC19YFR011C 513 nt3.18□□□□□ -1.9
RPN11P43588 PRM8YGL053W 714 nt3.18□□□□□ -1.9
RPN11P43588 IME1YJR094C 1083 nt3.18□□□□□ -1.9
RPN11P43588 YLR222C-AYLR222C-A 231 nt3.18□□□□□ -1.9
RPN11P43588 YLR416CYLR416C 399 nt3.18□□□□□ -1.9
RPN11P43588 RRD2YPL152W 1077 nt3.18□□□□□ -1.9
RPN11P43588 PWP2YCR057C 2772 nt3.18□□□□□ -1.9
RPN11P43588 SET1YHR119W 3243 nt3.18□□□□□ -1.9
RPN11P43588 ARP8YOR141C 2646 nt3.18□□□□□ -1.9
RPN11P43588 NCS2YNL119W 1482 nt3.17□□□□□ -1.9
RPN11P43588 KAP123YER110C 3342 nt3.17□□□□□ -1.9
RPN11P43588 CPR5YDR304C 678 nt3.17□□□□□ -1.9
RPN11P43588 SCEIQ0160 708 nt3.17□□□□□ -1.9
RPN11P43588 LRP1YHR081W 555 nt3.17□□□□□ -1.9
RPN11P43588 DLS1YJL065C 504 nt3.17□□□□□ -1.9
RPN11P43588 VPS63YLR261C 327 nt3.17□□□□□ -1.9
RPN11P43588 SPC29YPL124W 762 nt3.17□□□□□ -1.9
RPN11P43588 YPR177CYPR177C 372 nt3.17□□□□□ -1.9
RPN11P43588 MBA1YBR185C 837 nt3.17□□□□□ -1.9
RPN11P43588 NTC20YBR188C 423 nt3.17□□□□□ -1.9
RPN11P43588 CIN1YOR349W 3045 nt3.17□□□□□ -1.9
RPN11P43588 MUS81YDR386W 1899 nt3.17□□□□□ -1.9
RPN11P43588 SHS1YDL225W 1656 nt3.17□□□□□ -1.9
RPN11P43588 DYN1YKR054C 12279 nt3.17□□□□□ -1.9
RPN11P43588 PRP8YHR165C 7242 nt3.16□□□□□ -1.9
RPN11P43588 MGT1YDL200C 567 nt3.16□□□□□ -1.9
RPN11P43588 ATP6Q0085 780 nt3.16□□□□□ -1.9
RPN11P43588 CIC1YHR052W 1131 nt3.16□□□□□ -1.9
RPN11P43588 YKL066WYKL066W 444 nt3.16□□□□□ -1.9
RPN11P43588 MRP8YKL142W 660 nt3.16□□□□□ -1.9
RPN11P43588 FYV7YLR068W 456 nt3.16□□□□□ -1.9
RPN11P43588 CWC24YLR323C 780 nt3.16□□□□□ -1.9
RPN11P43588 PDR17YNL264C 1053 nt3.16□□□□□ -1.9
RPN11P43588 YBR062CYBR062C 543 nt3.16□□□□□ -1.9
RPN11P43588 AIM4YBR194W 372 nt3.16□□□□□ -1.9
RPN11P43588 TMA64YDR117C 1698 nt3.16□□□□□ -1.9
RPN11P43588 ATP25YMR098C 1839 nt3.16□□□□□ -1.9
RPN11P43588 GAL80YML051W 1308 nt3.16□□□□□ -1.9
RPN11P43588 SKN7YHR206W 1869 nt3.16□□□□□ -1.9
RPN11P43588 ATG21YPL100W 1491 nt3.16□□□□□ -1.9
RPN11P43588 VHR1YIL056W 1923 nt3.15□□□□□ -1.9
RPN11P43588 MSH4YFL003C 2637 nt3.15□□□□□ -1.9
RPN11P43588 YJR037WYJR037W 384 nt3.15□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms