Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC78A2IDD5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 AP004607.4-201ENST00000530158 1459 ntBASIC20.94■□□□□ 0.94
CCDC78A2IDD5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 KRT18P61-201ENST00000585825 1298 ntBASIC20.94■□□□□ 0.94
CCDC78A2IDD5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC78A2IDD5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 AC026271.2-201ENST00000428091 497 ntBASIC20.93■□□□□ 0.94
CCDC78A2IDD5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 SLC7A5P2-201ENST00000553010 536 ntBASIC20.93■□□□□ 0.94
CCDC78A2IDD5 AC138907.5-202ENST00000569484 235 ntBASIC20.93■□□□□ 0.94
CCDC78A2IDD5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 AC008175.2-201ENST00000612840 297 ntBASIC20.93■□□□□ 0.94
CCDC78A2IDD5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC78A2IDD5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DUX4L2-201ENST00000561772 1275 ntBASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DUX4L6-201ENST00000626483 1275 ntBASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DUX4L1-201ENST00000627662 1275 ntBASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DUX4L8-201ENST00000629013 1275 ntBASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DUX4L3-201ENST00000630187 1275 ntBASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DUX4L7-201ENST00000630678 1275 ntBASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DUX4L5-201ENST00000630834 1275 ntBASIC20.92■□□□□ 0.94
CCDC78A2IDD5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC78A2IDD5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 AC010141.2-201ENST00000452426 721 ntBASIC20.91■□□□□ 0.94
CCDC78A2IDD5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC78A2IDD5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms