Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH20Q9HBT6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.14■□□□□ 0.5
CDH20Q9HBT6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CDH20Q9HBT6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDH20Q9HBT6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDH20Q9HBT6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 AC245052.3-201ENST00000450182 901 ntBASIC18.13■□□□□ 0.49
CDH20Q9HBT6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH20Q9HBT6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 AC092666.2-201ENST00000613287 246 ntBASIC18.12■□□□□ 0.49
CDH20Q9HBT6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDH20Q9HBT6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH20Q9HBT6 AC006015.1-201ENST00000429970 570 ntBASIC18.11■□□□□ 0.49
CDH20Q9HBT6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms