Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXT1Q16394 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
EXT1Q16394 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.25■□□□□ 0.67
EXT1Q16394 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EXT1Q16394 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXT1Q16394 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXT1Q16394 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.25■□□□□ 0.67
EXT1Q16394 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
EXT1Q16394 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.25■□□□□ 0.67
EXT1Q16394 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.25■□□□□ 0.67
EXT1Q16394 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.25■□□□□ 0.67
EXT1Q16394 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EXT1Q16394 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
EXT1Q16394 AC079834.2-201ENST00000609776 1949 ntBASIC19.25■□□□□ 0.67
EXT1Q16394 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
EXT1Q16394 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 AC244015.2-201ENST00000616358 1861 ntBASIC19.24■□□□□ 0.67
EXT1Q16394 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.24■□□□□ 0.67
EXT1Q16394 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.24■□□□□ 0.67
EXT1Q16394 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.24■□□□□ 0.67
EXT1Q16394 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.24■□□□□ 0.67
EXT1Q16394 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.24■□□□□ 0.67
EXT1Q16394 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.24■□□□□ 0.67
EXT1Q16394 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.24■□□□□ 0.67
EXT1Q16394 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.24■□□□□ 0.67
EXT1Q16394 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EXT1Q16394 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
EXT1Q16394 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EXT1Q16394 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EXT1Q16394 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EXT1Q16394 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EXT1Q16394 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EXT1Q16394 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.23■□□□□ 0.67
EXT1Q16394 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EXT1Q16394 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.23■□□□□ 0.67
EXT1Q16394 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.23■□□□□ 0.67
EXT1Q16394 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.23■□□□□ 0.67
EXT1Q16394 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.23■□□□□ 0.67
EXT1Q16394 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EXT1Q16394 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EXT1Q16394 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EXT1Q16394 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 AC116050.2-201ENST00000612102 1779 ntBASIC19.22■□□□□ 0.67
EXT1Q16394 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.22■□□□□ 0.67
EXT1Q16394 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.22■□□□□ 0.67
EXT1Q16394 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
EXT1Q16394 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.22■□□□□ 0.67
EXT1Q16394 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EXT1Q16394 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.21■□□□□ 0.67
EXT1Q16394 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
EXT1Q16394 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.21■□□□□ 0.67
EXT1Q16394 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EXT1Q16394 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EXT1Q16394 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.21■□□□□ 0.67
EXT1Q16394 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.21■□□□□ 0.67
EXT1Q16394 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.21■□□□□ 0.67
EXT1Q16394 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.21■□□□□ 0.67
EXT1Q16394 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
EXT1Q16394 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.21■□□□□ 0.67
EXT1Q16394 CD99P1-205ENST00000527459 561 ntBASIC19.21■□□□□ 0.67
EXT1Q16394 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.21■□□□□ 0.67
EXT1Q16394 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.21■□□□□ 0.67
EXT1Q16394 KRT18P6-201ENST00000555540 1265 ntBASIC19.21■□□□□ 0.67
EXT1Q16394 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.21■□□□□ 0.67
EXT1Q16394 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.21■□□□□ 0.67
EXT1Q16394 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EXT1Q16394 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EXT1Q16394 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms