Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 TPS2YDR074W 2691 nt3.24□□□□□ -1.89
SUB1P54000 ADK1YDR226W 669 nt3.24□□□□□ -1.89
SUB1P54000 YGR050CYGR050C 357 nt3.24□□□□□ -1.89
SUB1P54000 RTS3YGR161C 792 nt3.24□□□□□ -1.89
SUB1P54000 COX3Q0275 810 nt3.24□□□□□ -1.89
SUB1P54000 YAP7YOL028C 738 nt3.24□□□□□ -1.89
SUB1P54000 SPR2YOR214C 711 nt3.24□□□□□ -1.89
SUB1P54000 BUD4YJR092W 4344 nt3.24□□□□□ -1.89
SUB1P54000 SRB8YCR081W 4284 nt3.24□□□□□ -1.89
SUB1P54000 SIR3YLR442C 2937 nt3.24□□□□□ -1.89
SUB1P54000 ORC2YBR060C 1863 nt3.24□□□□□ -1.89
SUB1P54000 SHQ1YIL104C 1524 nt3.24□□□□□ -1.89
SUB1P54000 TMA64YDR117C 1698 nt3.24□□□□□ -1.89
SUB1P54000 EXO5YBR163W 1758 nt3.23□□□□□ -1.89
SUB1P54000 HRD3YLR207W 2502 nt3.23□□□□□ -1.89
SUB1P54000 RNP1YLL046C 750 nt3.23□□□□□ -1.89
SUB1P54000 YLR285C-AYLR285C-A 171 nt3.23□□□□□ -1.89
SUB1P54000 YBR062CYBR062C 543 nt3.23□□□□□ -1.89
SUB1P54000 MMS1YPR164W 4224 nt3.23□□□□□ -1.89
SUB1P54000 ALY1YKR021W 2748 nt3.23□□□□□ -1.89
SUB1P54000 PCK1YKR097W 1650 nt3.23□□□□□ -1.89
SUB1P54000 YIL169CYIL169C 2988 nt3.23□□□□□ -1.89
SUB1P54000 TRZ1YKR079C 2517 nt3.22□□□□□ -1.89
SUB1P54000 SEC14YMR079W 915 nt3.22□□□□□ -1.89
SUB1P54000 PAI3YMR174C 207 nt3.22□□□□□ -1.89
SUB1P54000 YBL068W-AYBL068W-A 237 nt3.22□□□□□ -1.89
SUB1P54000 IMP4YNL075W 873 nt3.22□□□□□ -1.89
SUB1P54000 YNR034W-AYNR034W-A 297 nt3.22□□□□□ -1.89
SUB1P54000 YBR051WYBR051W 351 nt3.22□□□□□ -1.89
SUB1P54000 ACM1YPL267W 630 nt3.22□□□□□ -1.89
SUB1P54000 YLR278CYLR278C 4026 nt3.22□□□□□ -1.89
SUB1P54000 JJJ1YNL227C 1773 nt3.22□□□□□ -1.89
SUB1P54000 SGM1YJR134C 2124 nt3.22□□□□□ -1.89
SUB1P54000 COP1YDL145C 3606 nt3.21□□□□□ -1.89
SUB1P54000 DBP7YKR024C 2229 nt3.21□□□□□ -1.89
SUB1P54000 INP51YIL002C 2841 nt3.21□□□□□ -1.9
SUB1P54000 PSD2YGR170W 3417 nt3.21□□□□□ -1.9
SUB1P54000 PBS2YJL128C 2007 nt3.21□□□□□ -1.9
SUB1P54000 YER189WYER189W 369 nt3.21□□□□□ -1.9
SUB1P54000 CWC23YGL128C 852 nt3.21□□□□□ -1.9
SUB1P54000 YGL218WYGL218W 651 nt3.21□□□□□ -1.9
SUB1P54000 YHL006W-AYHL006W-A 354 nt3.21□□□□□ -1.9
SUB1P54000 ATG27YJL178C 816 nt3.21□□□□□ -1.9
SUB1P54000 VPH2YKL119C 648 nt3.21□□□□□ -1.9
SUB1P54000 YPT6YLR262C 648 nt3.21□□□□□ -1.9
SUB1P54000 END3YNL084C 1050 nt3.21□□□□□ -1.9
SUB1P54000 YNL226WYNL226W 411 nt3.21□□□□□ -1.9
SUB1P54000 SIP3YNL257C 3690 nt3.21□□□□□ -1.9
SUB1P54000 VPS38YLR360W 1320 nt3.2□□□□□ -1.9
SUB1P54000 CDC37YDR168W 1521 nt3.2□□□□□ -1.9
SUB1P54000 YCR013CYCR013C 648 nt3.2□□□□□ -1.9
SUB1P54000 UBC13YDR092W 462 nt3.2□□□□□ -1.9
SUB1P54000 RSM28YDR494W 1086 nt3.2□□□□□ -1.9
SUB1P54000 RPL27AYHR010W 411 nt3.2□□□□□ -1.9
SUB1P54000 FYV4YHR059W 393 nt3.2□□□□□ -1.9
SUB1P54000 IPP1YBR011C 864 nt3.2□□□□□ -1.9
SUB1P54000 YPL119C-AYPL119C-A 264 nt3.2□□□□□ -1.9
SUB1P54000 UBX3YDL091C 1368 nt3.2□□□□□ -1.9
SUB1P54000 UBP14YBR058C 2346 nt3.2□□□□□ -1.9
SUB1P54000 FLO5YHR211W 3228 nt3.19□□□□□ -1.9
SUB1P54000 SPO14YKR031C 5052 nt3.19□□□□□ -1.9
SUB1P54000 CWC2YDL209C 1020 nt3.19□□□□□ -1.9
SUB1P54000 YEA4YEL004W 1029 nt3.19□□□□□ -1.9
SUB1P54000 NTF2YER009W 378 nt3.19□□□□□ -1.9
SUB1P54000 RNR2YJL026W 1200 nt3.19□□□□□ -1.9
SUB1P54000 COX8YLR395C 237 nt3.19□□□□□ -1.9
SUB1P54000 ATG3YNR007C 933 nt3.19□□□□□ -1.9
SUB1P54000 SUS1YBR111W-A 291 nt3.19□□□□□ -1.9
SUB1P54000 SHS1YDL225W 1656 nt3.19□□□□□ -1.9
SUB1P54000 DAL5YJR152W 1632 nt3.19□□□□□ -1.9
SUB1P54000 MDM1YML104C 3384 nt3.18□□□□□ -1.9
SUB1P54000 tQ(UUG)BtQ(UUG)B 72 nt3.18□□□□□ -1.9
SUB1P54000 PPX1YHR201C 1194 nt3.18□□□□□ -1.9
SUB1P54000 YLL044WYLL044W 447 nt3.18□□□□□ -1.9
SUB1P54000 YLR307C-AYLR307C-A 264 nt3.18□□□□□ -1.9
SUB1P54000 MPP6YNR024W 561 nt3.18□□□□□ -1.9
SUB1P54000 SWA2YDR320C 2007 nt3.18□□□□□ -1.9
SUB1P54000 ROG1YGL144C 2058 nt3.18□□□□□ -1.9
SUB1P54000 ATG13YPR185W 2217 nt3.17□□□□□ -1.9
SUB1P54000 SAP1YER047C 2694 nt3.17□□□□□ -1.9
SUB1P54000 YHR080CYHR080C 4038 nt3.17□□□□□ -1.9
SUB1P54000 GCD6YDR211W 2139 nt3.17□□□□□ -1.9
SUB1P54000 NMD2YHR077C 3270 nt3.17□□□□□ -1.9
SUB1P54000 GLC7YER133W 939 nt3.17□□□□□ -1.9
SUB1P54000 LOC1YFR001W 615 nt3.17□□□□□ -1.9
SUB1P54000 YJL047C-AYJL047C-A 135 nt3.17□□□□□ -1.9
SUB1P54000 YOL085W-AYOL085W-A 213 nt3.17□□□□□ -1.9
SUB1P54000 UTP15YMR093W 1542 nt3.17□□□□□ -1.9
SUB1P54000 YDR261W-AYDR261W-A 1317 nt3.17□□□□□ -1.9
SUB1P54000 KIN82YCR091W 2163 nt3.17□□□□□ -1.9
SUB1P54000 YNL018CYNL018C 1839 nt3.16□□□□□ -1.9
SUB1P54000 YIL166CYIL166C 1629 nt3.16□□□□□ -1.9
SUB1P54000 YKL222CYKL222C 2118 nt3.16□□□□□ -1.9
SUB1P54000 BNA4YBL098W 1383 nt3.16□□□□□ -1.9
SUB1P54000 MPO1YGL010W 525 nt3.16□□□□□ -1.9
SUB1P54000 CKA1YIL035C 1119 nt3.16□□□□□ -1.9
SUB1P54000 YLR217WYLR217W 324 nt3.16□□□□□ -1.9
SUB1P54000 VPS63YLR261C 327 nt3.16□□□□□ -1.9
SUB1P54000 YLR297WYLR297W 390 nt3.16□□□□□ -1.9
SUB1P54000 YMR173W-AYMR173W-A 1185 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 34.2 ms