Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 DDR48YMR173W 1293 nt3.56□□□□□ -1.84
RFX1P48743 RPL16BYNL069C 597 nt3.56□□□□□ -1.84
RFX1P48743 RIO2YNL207W 1278 nt3.56□□□□□ -1.84
RFX1P48743 YBR051WYBR051W 351 nt3.56□□□□□ -1.84
RFX1P48743 NSP1YJL041W 2472 nt3.56□□□□□ -1.84
RFX1P48743 SCY1YGL083W 2415 nt3.56□□□□□ -1.84
RFX1P48743 YRM1YOR172W 2361 nt3.56□□□□□ -1.84
RFX1P48743 YJL132WYJL132W 2253 nt3.56□□□□□ -1.84
RFX1P48743 RIM13YMR154C 2184 nt3.56□□□□□ -1.84
RFX1P48743 TDA1YMR291W 1761 nt3.56□□□□□ -1.84
RFX1P48743 POL4YCR014C 1749 nt3.56□□□□□ -1.84
RFX1P48743 VID27YNL212W 2349 nt3.55□□□□□ -1.84
RFX1P48743 SEG1YMR086W 2883 nt3.55□□□□□ -1.84
RFX1P48743 HAA1YPR008W 2085 nt3.55□□□□□ -1.84
RFX1P48743 YER087C-AYER087C-A 552 nt3.55□□□□□ -1.84
RFX1P48743 MVB12YGR206W 306 nt3.55□□□□□ -1.84
RFX1P48743 BIG1YHR101C 1008 nt3.55□□□□□ -1.84
RFX1P48743 YHR138CYHR138C 345 nt3.55□□□□□ -1.84
RFX1P48743 AIM26YKL037W 357 nt3.55□□□□□ -1.84
RFX1P48743 AIM29YKR074W 468 nt3.55□□□□□ -1.84
RFX1P48743 ECM4YKR076W 1113 nt3.55□□□□□ -1.84
RFX1P48743 YLR076CYLR076C 423 nt3.55□□□□□ -1.84
RFX1P48743 YOL159CYOL159C 516 nt3.55□□□□□ -1.84
RFX1P48743 YLR177WYLR177W 1887 nt3.55□□□□□ -1.84
RFX1P48743 SMC3YJL074C 3693 nt3.55□□□□□ -1.84
RFX1P48743 HEF3YNL014W 3135 nt3.55□□□□□ -1.84
RFX1P48743 FLO10YKR102W 3510 nt3.54□□□□□ -1.84
RFX1P48743 YER006C-AYER006C-A 318 nt3.54□□□□□ -1.84
RFX1P48743 YGL015CYGL015C 393 nt3.54□□□□□ -1.84
RFX1P48743 TPM2YIL138C 486 nt3.54□□□□□ -1.84
RFX1P48743 MCR1YKL150W 909 nt3.54□□□□□ -1.84
RFX1P48743 YNL277W-AYNL277W-A 189 nt3.54□□□□□ -1.84
RFX1P48743 MPD2YOL088C 834 nt3.54□□□□□ -1.84
RFX1P48743 YOL114CYOL114C 609 nt3.54□□□□□ -1.84
RFX1P48743 YBR062CYBR062C 543 nt3.54□□□□□ -1.84
RFX1P48743 YPR108W-AYPR108W-A 213 nt3.54□□□□□ -1.84
RFX1P48743 PAM1YDR251W 2493 nt3.54□□□□□ -1.84
RFX1P48743 VAC14YLR386W 2643 nt3.54□□□□□ -1.84
RFX1P48743 SSF1YHR066W 1362 nt3.53□□□□□ -1.84
RFX1P48743 LRG1YDL240W 3054 nt3.53□□□□□ -1.84
RFX1P48743 SPA2YLL021W 4401 nt3.53□□□□□ -1.84
RFX1P48743 RNR1YER070W 2667 nt3.53□□□□□ -1.84
RFX1P48743 YDR008CYDR008C 351 nt3.53□□□□□ -1.84
RFX1P48743 IRC2YDR112W 309 nt3.53□□□□□ -1.84
RFX1P48743 SDP1YIL113W 630 nt3.53□□□□□ -1.84
RFX1P48743 YLR101CYLR101C 396 nt3.53□□□□□ -1.84
RFX1P48743 YML003WYML003W 873 nt3.53□□□□□ -1.84
RFX1P48743 RAD33YML011C 534 nt3.53□□□□□ -1.84
RFX1P48743 YML084WYML084W 309 nt3.53□□□□□ -1.84
RFX1P48743 TIF11YMR260C 462 nt3.53□□□□□ -1.84
RFX1P48743 YBR209WYBR209W 318 nt3.53□□□□□ -1.84
RFX1P48743 ERB1YMR049C 2424 nt3.53□□□□□ -1.84
RFX1P48743 TIF4631YGR162W 2859 nt3.53□□□□□ -1.85
RFX1P48743 DSF2YBR007C 2211 nt3.52□□□□□ -1.85
RFX1P48743 SEC6YIL068C 2418 nt3.52□□□□□ -1.85
RFX1P48743 PHM6YDR281C 315 nt3.52□□□□□ -1.85
RFX1P48743 YIL030W-AYIL030W-A 339 nt3.52□□□□□ -1.85
RFX1P48743 YAL004WYAL004W 648 nt3.52□□□□□ -1.85
RFX1P48743 YMR013C-AYMR013C-A 150 nt3.52□□□□□ -1.85
RFX1P48743 RFC3YNL290W 1023 nt3.52□□□□□ -1.85
RFX1P48743 SFM1YOR021C 642 nt3.52□□□□□ -1.85
RFX1P48743 YPL034WYPL034W 498 nt3.52□□□□□ -1.85
RFX1P48743 ARR2YPR200C 393 nt3.52□□□□□ -1.85
RFX1P48743 RSC1YGR056W 2787 nt3.52□□□□□ -1.85
RFX1P48743 URA2YJL130C 6645 nt3.52□□□□□ -1.85
RFX1P48743 EAP1YKL204W 1899 nt3.52□□□□□ -1.85
RFX1P48743 CPA2YJR109C 3357 nt3.51□□□□□ -1.85
RFX1P48743 YRR1YOR162C 2433 nt3.51□□□□□ -1.85
RFX1P48743 DAS1YJL149W 1992 nt3.51□□□□□ -1.85
RFX1P48743 YER135CYER135C 393 nt3.51□□□□□ -1.85
RFX1P48743 YAL068W-AYAL068W-A 255 nt3.51□□□□□ -1.85
RFX1P48743 DYN3YMR299C 939 nt3.51□□□□□ -1.85
RFX1P48743 YBL071CYBL071C 309 nt3.51□□□□□ -1.85
RFX1P48743 SRP68YPL243W 1800 nt3.51□□□□□ -1.85
RFX1P48743 SLM2YNL047C 1971 nt3.51□□□□□ -1.85
RFX1P48743 BI4Q0120 1917 nt3.5□□□□□ -1.85
RFX1P48743 UTP15YMR093W 1542 nt3.5□□□□□ -1.85
RFX1P48743 SSE2YBR169C 2082 nt3.5□□□□□ -1.85
RFX1P48743 YBR259WYBR259W 2067 nt3.5□□□□□ -1.85
RFX1P48743 OPI6YDL096C 327 nt3.5□□□□□ -1.85
RFX1P48743 ARF1YDL192W 546 nt3.5□□□□□ -1.85
RFX1P48743 RTR2YDR066C 591 nt3.5□□□□□ -1.85
RFX1P48743 RPL22AYLR061W 366 nt3.5□□□□□ -1.85
RFX1P48743 YMR304C-AYMR304C-A 351 nt3.5□□□□□ -1.85
RFX1P48743 LTP1YPR073C 486 nt3.5□□□□□ -1.85
RFX1P48743 MSS18YPR134W 807 nt3.5□□□□□ -1.85
RFX1P48743 MDN1YLR106C 14733 nt3.5□□□□□ -1.85
RFX1P48743 CDC55YGL190C 1581 nt3.5□□□□□ -1.85
RFX1P48743 IMD4YML056C 1575 nt3.5□□□□□ -1.85
RFX1P48743 HFD1YMR110C 1599 nt3.5□□□□□ -1.85
RFX1P48743 SPT16YGL207W 3108 nt3.5□□□□□ -1.85
RFX1P48743 ARG5,6YER069W 2592 nt3.5□□□□□ -1.85
RFX1P48743 SMI1YGR229C 1518 nt3.49□□□□□ -1.85
RFX1P48743 YPS6YIR039C 1614 nt3.49□□□□□ -1.85
RFX1P48743 BAR1YIL015W 1764 nt3.49□□□□□ -1.85
RFX1P48743 YDR338CYDR338C 2088 nt3.49□□□□□ -1.85
RFX1P48743 ATG31YDR022C 591 nt3.49□□□□□ -1.85
RFX1P48743 YFR054CYFR054C 579 nt3.49□□□□□ -1.85
RFX1P48743 ERV1YGR029W 570 nt3.49□□□□□ -1.85
RFX1P48743 GPX2YBR244W 489 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 60.2 ms