Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 CYP2T3P-201ENST00000601990 817 ntBASIC24.3■■□□□ 1.48
EFCC1Q9HA90 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
EFCC1Q9HA90 AC087742.1-201ENST00000575880 1738 ntBASIC24.3■■□□□ 1.48
EFCC1Q9HA90 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.29■■□□□ 1.48
EFCC1Q9HA90 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 POU5F1P4-201ENST00000413175 1085 ntBASIC24.28■■□□□ 1.48
EFCC1Q9HA90 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 SPIB-206ENST00000596074 847 ntTSL 2 BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
EFCC1Q9HA90 RBM17P2-201ENST00000616397 1405 ntBASIC24.27■■□□□ 1.48
EFCC1Q9HA90 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
EFCC1Q9HA90 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 AC060766.5-201ENST00000590539 871 ntBASIC24.26■■□□□ 1.47
EFCC1Q9HA90 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
EFCC1Q9HA90 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.25■■□□□ 1.47
EFCC1Q9HA90 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
EFCC1Q9HA90 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms