Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 KRT19P1-201ENST00000405746 1186 ntBASIC20.1■□□□□ 0.81
KRT78Q8N1N4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 AF106564.1-201ENST00000607058 2553 ntBASIC20.1■□□□□ 0.81
KRT78Q8N1N4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
KRT78Q8N1N4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
KRT78Q8N1N4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 KRT18P20-201ENST00000548986 1279 ntBASIC20.08■□□□□ 0.81
KRT78Q8N1N4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
KRT78Q8N1N4 AC087623.3-201ENST00000607047 1098 ntBASIC20.08■□□□□ 0.81
KRT78Q8N1N4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
KRT78Q8N1N4 KRT16P2-201ENST00000414673 1423 ntBASIC20.08■□□□□ 0.8
KRT78Q8N1N4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
KRT78Q8N1N4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 NTF6G-201ENST00000591094 616 ntBASIC20.07■□□□□ 0.8
KRT78Q8N1N4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
KRT78Q8N1N4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 RARRES2P6-201ENST00000567333 442 ntBASIC20.06■□□□□ 0.8
KRT78Q8N1N4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KRT78Q8N1N4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms