Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 tN(GUU)N1tN(GUU)N1 74 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 tN(GUU)N2tN(GUU)N2 74 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 tN(GUU)O1tN(GUU)O1 74 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 tN(GUU)O2tN(GUU)O2 74 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 tN(GUU)PtN(GUU)P 74 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 HSK3YKL138C-A 210 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 URA10YMR271C 684 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 DIB1YPR082C 432 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 REI1YBR267W 1182 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 GSM1YJL103C 1857 nt4.64□□□□□ -1.67
TY1A-MR1Q04215 PUF3YLL013C 2640 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 MVP1YMR004W 1536 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 YND1YER005W 1893 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 STE20YHL007C 2820 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 IRC4YDR540C 540 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 YAL059C-AYAL059C-A 423 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 YLR428CYLR428C 345 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 YMR141W-AYMR141W-A 225 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 snR13snR13 124 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 SED4YCR067C 3198 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 CTM1YHR109W 1758 nt4.63□□□□□ -1.67
TY1A-MR1Q04215 YTA12YMR089C 2478 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 YDR526CYDR526C 471 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 ALG13YGL047W 609 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 NOP19YGR251W 591 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 YMR230W-AYMR230W-A 189 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 HHF2YNL030W 312 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 ATX1YNL259C 222 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 SRL1YOR247W 633 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 DSF2YBR007C 2211 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 ATH1YPR026W 3636 nt4.62□□□□□ -1.67
TY1A-MR1Q04215 NDC80YIL144W 2076 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 ASI1YMR119W 1875 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 YDL062WYDL062W 426 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 YDL228CYDL228C 642 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 MIC19YFR011C 513 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 RPS4BYHR203C 786 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 YJR085CYJR085C 318 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 TMA10YLR327C 261 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 PPG1YNR032W 1107 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 VIK1YPL253C 1944 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 SEC39YLR440C 2130 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 OSW7YFR039C 1533 nt4.61□□□□□ -1.67
TY1A-MR1Q04215 NUD1YOR373W 2556 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 MMP1YLL061W 1752 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 NPR2YEL062W 1848 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 TPD3YAL016W 1908 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 UTP13YLR222C 2454 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 YDL034WYDL034W 345 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 COX26YDR119W-A 201 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 RDN58-1RDN58-1 158 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 RDN58-2RDN58-2 158 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 YBL073WYBL073W 312 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 YBR064WYBR064W 429 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 RSC6YCR052W 1452 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 AFT1YGL071W 2073 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 POL12YBL035C 2118 nt4.6□□□□□ -1.67
TY1A-MR1Q04215 DAL81YIR023W 2913 nt4.59□□□□□ -1.67
TY1A-MR1Q04215 RAD61YDR014W 1944 nt4.59□□□□□ -1.67
TY1A-MR1Q04215 YGL052WYGL052W 306 nt4.59□□□□□ -1.67
TY1A-MR1Q04215 TOS3YGL179C 1683 nt4.59□□□□□ -1.67
TY1A-MR1Q04215 VEL1YGL258W 621 nt4.59□□□□□ -1.67
TY1A-MR1Q04215 SPP382YLR424W 2127 nt4.59□□□□□ -1.67
TY1A-MR1Q04215 RPS7BYNL096C 573 nt4.59□□□□□ -1.67
TY1A-MR1Q04215 YRR1YOR162C 2433 nt4.59□□□□□ -1.67
TY1A-MR1Q04215 RPL21BYPL079W 483 nt4.59□□□□□ -1.67
TY1A-MR1Q04215 YHR182WYHR182W 2358 nt4.58□□□□□ -1.68
TY1A-MR1Q04215 GPP2YER062C 753 nt4.58□□□□□ -1.68
TY1A-MR1Q04215 YFR056CYFR056C 369 nt4.58□□□□□ -1.68
TY1A-MR1Q04215 RPL28YGL103W 450 nt4.58□□□□□ -1.68
TY1A-MR1Q04215 YHR214W-AYHR214W-A 486 nt4.58□□□□□ -1.68
TY1A-MR1Q04215 YAR068WYAR068W 486 nt4.58□□□□□ -1.68
TY1A-MR1Q04215 GDB1YPR184W 4611 nt4.58□□□□□ -1.68
TY1A-MR1Q04215 ASK10YGR097W 3441 nt4.58□□□□□ -1.68
TY1A-MR1Q04215 STI1YOR027W 1770 nt4.58□□□□□ -1.68
TY1A-MR1Q04215 SYP1YCR030C 2613 nt4.57□□□□□ -1.68
TY1A-MR1Q04215 YFR010W-AYFR010W-A 189 nt4.57□□□□□ -1.68
TY1A-MR1Q04215 PXR1YGR280C 816 nt4.57□□□□□ -1.68
TY1A-MR1Q04215 HSX1tR(CCU)J 72 nt4.57□□□□□ -1.68
TY1A-MR1Q04215 SIP18YMR175W 240 nt4.57□□□□□ -1.68
TY1A-MR1Q04215 ARN2YHL047C 1863 nt4.57□□□□□ -1.68
TY1A-MR1Q04215 UTP25YIL091C 2166 nt4.57□□□□□ -1.68
TY1A-MR1Q04215 YJL132WYJL132W 2253 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 HTL1YCR020W-B 237 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 RPL11BYGR085C 525 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 YLR140WYLR140W 327 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 YOR008C-AYOR008C-A 225 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 YPL062WYPL062W 405 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 SSO1YPL232W 873 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 RPL11AYPR102C 525 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 YBR197CYBR197C 654 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 HDA2YDR295C 2025 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 GAS3YMR215W 1575 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 SNF3YDL194W 2655 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 UTP15YMR093W 1542 nt4.56□□□□□ -1.68
TY1A-MR1Q04215 SUL2YLR092W 2682 nt4.55□□□□□ -1.68
TY1A-MR1Q04215 snR55snR55 98 nt4.55□□□□□ -1.68
TY1A-MR1Q04215 SIT4YDL047W 936 nt4.55□□□□□ -1.68
TY1A-MR1Q04215 PET191YJR034W 327 nt4.55□□□□□ -1.68
TY1A-MR1Q04215 TAR1YLR154W-C 375 nt4.55□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 52.7 ms