Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 SIN4YNL236W 2925 nt3.8□□□□□ -1.8
SSL2Q00578 ADY4YLR227C 1482 nt3.79□□□□□ -1.8
SSL2Q00578 ALG8YOR067C 1734 nt3.79□□□□□ -1.8
SSL2Q00578 HDA2YDR295C 2025 nt3.79□□□□□ -1.8
SSL2Q00578 GSC2YGR032W 5688 nt3.79□□□□□ -1.8
SSL2Q00578 RRP42YDL111C 798 nt3.79□□□□□ -1.8
SSL2Q00578 NTF2YER009W 378 nt3.79□□□□□ -1.8
SSL2Q00578 RGI2YIL057C 495 nt3.79□□□□□ -1.8
SSL2Q00578 POG1YIL122W 1056 nt3.79□□□□□ -1.8
SSL2Q00578 YKL044WYKL044W 321 nt3.79□□□□□ -1.8
SSL2Q00578 AIM29YKR074W 468 nt3.79□□□□□ -1.8
SSL2Q00578 YLR287CYLR287C 1068 nt3.79□□□□□ -1.8
SSL2Q00578 CTK3YML112W 891 nt3.79□□□□□ -1.8
SSL2Q00578 YNL089CYNL089C 477 nt3.79□□□□□ -1.8
SSL2Q00578 SWM2YNR004W 441 nt3.79□□□□□ -1.8
SSL2Q00578 RPL19AYBR084C-A 570 nt3.79□□□□□ -1.8
SSL2Q00578 CHA4YLR098C 1947 nt3.79□□□□□ -1.8
SSL2Q00578 LST4YKL176C 2487 nt3.78□□□□□ -1.8
SSL2Q00578 MFA1YDR461W 111 nt3.78□□□□□ -1.8
SSL2Q00578 YER068C-AYER068C-A 432 nt3.78□□□□□ -1.8
SSL2Q00578 MTM1YGR257C 1101 nt3.78□□□□□ -1.8
SSL2Q00578 YAP3YHL009C 993 nt3.78□□□□□ -1.8
SSL2Q00578 RPS20YHL015W 366 nt3.78□□□□□ -1.8
SSL2Q00578 YIR020C-BYIR020C-B 735 nt3.78□□□□□ -1.8
SSL2Q00578 TIF11YMR260C 462 nt3.78□□□□□ -1.8
SSL2Q00578 INN1YNL152W 1230 nt3.78□□□□□ -1.8
SSL2Q00578 YPL107WYPL107W 747 nt3.78□□□□□ -1.8
SSL2Q00578 SHG1YBR258C 429 nt3.78□□□□□ -1.8
SSL2Q00578 15S_rRNA15S_rRNA 1649 nt3.77□□□□□ -1.81
SSL2Q00578 TPO5YKL174C 1857 nt3.77□□□□□ -1.81
SSL2Q00578 STU2YLR045C 2667 nt3.77□□□□□ -1.81
SSL2Q00578 PDR12YPL058C 4536 nt3.77□□□□□ -1.81
SSL2Q00578 SWF1YDR126W 1011 nt3.77□□□□□ -1.81
SSL2Q00578 YER135CYER135C 393 nt3.77□□□□□ -1.81
SSL2Q00578 YER181CYER181C 324 nt3.77□□□□□ -1.81
SSL2Q00578 YKL069WYKL069W 543 nt3.77□□□□□ -1.81
SSL2Q00578 PAI3YMR174C 207 nt3.77□□□□□ -1.81
SSL2Q00578 GOT1YMR292W 417 nt3.77□□□□□ -1.81
SSL2Q00578 TPK2YPL203W 1143 nt3.77□□□□□ -1.81
SSL2Q00578 YBR062CYBR062C 543 nt3.77□□□□□ -1.81
SSL2Q00578 SSL1YLR005W 1386 nt3.76□□□□□ -1.81
SSL2Q00578 YKR078WYKR078W 1758 nt3.76□□□□□ -1.81
SSL2Q00578 PSY4YBL046W 1326 nt3.76□□□□□ -1.81
SSL2Q00578 YFL065CYFL065C 309 nt3.76□□□□□ -1.81
SSL2Q00578 GEP4YHR100C 558 nt3.76□□□□□ -1.81
SSL2Q00578 EPT1YHR123W 1176 nt3.76□□□□□ -1.81
SSL2Q00578 AGE2YIL044C 897 nt3.76□□□□□ -1.81
SSL2Q00578 YJL127C-BYJL127C-B 159 nt3.76□□□□□ -1.81
SSL2Q00578 DAD2YKR083C 402 nt3.76□□□□□ -1.81
SSL2Q00578 RPS1AYLR441C 768 nt3.76□□□□□ -1.81
SSL2Q00578 CMC2YBL059C-A 330 nt3.76□□□□□ -1.81
SSL2Q00578 GRE2YOL151W 1029 nt3.76□□□□□ -1.81
SSL2Q00578 YPR197CYPR197C 564 nt3.76□□□□□ -1.81
SSL2Q00578 DAS1YJL149W 1992 nt3.76□□□□□ -1.81
SSL2Q00578 YDL071CYDL071C 375 nt3.75□□□□□ -1.81
SSL2Q00578 IES6YEL044W 501 nt3.75□□□□□ -1.81
SSL2Q00578 VFA1YER128W 612 nt3.75□□□□□ -1.81
SSL2Q00578 YFR010W-AYFR010W-A 189 nt3.75□□□□□ -1.81
SSL2Q00578 MRM2YGL136C 963 nt3.75□□□□□ -1.81
SSL2Q00578 YOR203WYOR203W 354 nt3.75□□□□□ -1.81
SSL2Q00578 HEF3YNL014W 3135 nt3.75□□□□□ -1.81
SSL2Q00578 RSC1YGR056W 2787 nt3.75□□□□□ -1.81
SSL2Q00578 SHQ1YIL104C 1524 nt3.75□□□□□ -1.81
SSL2Q00578 YDL176WYDL176W 2127 nt3.74□□□□□ -1.81
SSL2Q00578 MYO3YKL129C 3819 nt3.74□□□□□ -1.81
SSL2Q00578 SIZ1YDR409W 2715 nt3.74□□□□□ -1.81
SSL2Q00578 HUL5YGL141W 2733 nt3.74□□□□□ -1.81
SSL2Q00578 PKP2YGL059W 1476 nt3.74□□□□□ -1.81
SSL2Q00578 DAL5YJR152W 1632 nt3.74□□□□□ -1.81
SSL2Q00578 EXO5YBR163W 1758 nt3.74□□□□□ -1.81
SSL2Q00578 PWP2YCR057C 2772 nt3.74□□□□□ -1.81
SSL2Q00578 PHM6YDR281C 315 nt3.74□□□□□ -1.81
SSL2Q00578 YER046W-AYER046W-A 330 nt3.74□□□□□ -1.81
SSL2Q00578 PET54YGR222W 882 nt3.74□□□□□ -1.81
SSL2Q00578 PBA1YLR199C 831 nt3.74□□□□□ -1.81
SSL2Q00578 BET5YML077W 480 nt3.74□□□□□ -1.81
SSL2Q00578 YML096WYML096W 1578 nt3.74□□□□□ -1.81
SSL2Q00578 HUB1YNR032C-A 222 nt3.74□□□□□ -1.81
SSL2Q00578 YOR053WYOR053W 342 nt3.74□□□□□ -1.81
SSL2Q00578 MRPL40YPL173W 894 nt3.74□□□□□ -1.81
SSL2Q00578 CMD1YBR109C 444 nt3.74□□□□□ -1.81
SSL2Q00578 YBR285WYBR285W 435 nt3.74□□□□□ -1.81
SSL2Q00578 GLC3YEL011W 2115 nt3.74□□□□□ -1.81
SSL2Q00578 YTA7YGR270W 4140 nt3.74□□□□□ -1.81
SSL2Q00578 YGR237CYGR237C 2358 nt3.74□□□□□ -1.81
SSL2Q00578 YJR030CYJR030C 2238 nt3.74□□□□□ -1.81
SSL2Q00578 RAD2YGR258C 3096 nt3.74□□□□□ -1.81
SSL2Q00578 YDR089WYDR089W 2610 nt3.74□□□□□ -1.81
SSL2Q00578 SEC15YGL233W 2733 nt3.73□□□□□ -1.81
SSL2Q00578 RPN3YER021W 1572 nt3.73□□□□□ -1.81
SSL2Q00578 AIP1YMR092C 1848 nt3.73□□□□□ -1.81
SSL2Q00578 SLD5YDR489W 885 nt3.73□□□□□ -1.81
SSL2Q00578 VMA10YHR039C-A 345 nt3.73□□□□□ -1.81
SSL2Q00578 BET3YKR068C 582 nt3.73□□□□□ -1.81
SSL2Q00578 YBR051WYBR051W 351 nt3.73□□□□□ -1.81
SSL2Q00578 YBR076C-AYBR076C-A 267 nt3.73□□□□□ -1.81
SSL2Q00578 STE24YJR117W 1362 nt3.73□□□□□ -1.81
SSL2Q00578 SYT1YPR095C 3681 nt3.73□□□□□ -1.81
SSL2Q00578 NCS2YNL119W 1482 nt3.73□□□□□ -1.81
SSL2Q00578 ZDS2YML109W 2829 nt3.72□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 194.8 ms