Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 IOC2YLR095C 2439 nt3.38□□□□□ -1.87
RPN11P43588 DAD1YDR016C 285 nt3.37□□□□□ -1.87
RPN11P43588 YDR537CYDR537C 606 nt3.37□□□□□ -1.87
RPN11P43588 SFT1YKL006C-A 294 nt3.37□□□□□ -1.87
RPN11P43588 RLP24YLR009W 600 nt3.37□□□□□ -1.87
RPN11P43588 GRE2YOL151W 1029 nt3.37□□□□□ -1.87
RPN11P43588 JJJ1YNL227C 1773 nt3.37□□□□□ -1.87
RPN11P43588 MNT4YNR059W 1743 nt3.36□□□□□ -1.87
RPN11P43588 APC5YOR249C 2058 nt3.36□□□□□ -1.87
RPN11P43588 snR68snR68 136 nt3.36□□□□□ -1.87
RPN11P43588 GRX2YDR513W 432 nt3.36□□□□□ -1.87
RPN11P43588 HLR1YDR528W 1272 nt3.36□□□□□ -1.87
RPN11P43588 PHD1YKL043W 1101 nt3.36□□□□□ -1.87
RPN11P43588 SDH3YKL141W 597 nt3.36□□□□□ -1.87
RPN11P43588 GIM3YNL153C 390 nt3.36□□□□□ -1.87
RPN11P43588 YNL235CYNL235C 432 nt3.36□□□□□ -1.87
RPN11P43588 INO4YOL108C 456 nt3.36□□□□□ -1.87
RPN11P43588 GCY1YOR120W 939 nt3.36□□□□□ -1.87
RPN11P43588 CUR1YPR158W 759 nt3.36□□□□□ -1.87
RPN11P43588 ANR2YKL047W 1551 nt3.36□□□□□ -1.87
RPN11P43588 YCT1YLL055W 1596 nt3.36□□□□□ -1.87
RPN11P43588 VPS9YML097C 1356 nt3.36□□□□□ -1.87
RPN11P43588 RIM4YHL024W 2142 nt3.35□□□□□ -1.87
RPN11P43588 HEF3YNL014W 3135 nt3.35□□□□□ -1.87
RPN11P43588 STT4YLR305C 5703 nt3.35□□□□□ -1.87
RPN11P43588 NUP159YIL115C 4383 nt3.35□□□□□ -1.87
RPN11P43588 SMC3YJL074C 3693 nt3.35□□□□□ -1.87
RPN11P43588 TMA20YER007C-A 546 nt3.35□□□□□ -1.87
RPN11P43588 THO1YER063W 657 nt3.35□□□□□ -1.87
RPN11P43588 SMX2YFL017W-A 234 nt3.35□□□□□ -1.87
RPN11P43588 MPO1YGL010W 525 nt3.35□□□□□ -1.87
RPN11P43588 GEP4YHR100C 558 nt3.35□□□□□ -1.87
RPN11P43588 STE18YJR086W 333 nt3.35□□□□□ -1.87
RPN11P43588 VMA5YKL080W 1179 nt3.35□□□□□ -1.87
RPN11P43588 YNL109WYNL109W 546 nt3.35□□□□□ -1.87
RPN11P43588 JID1YPR061C 906 nt3.35□□□□□ -1.87
RPN11P43588 PMR1YGL167C 2853 nt3.35□□□□□ -1.87
RPN11P43588 ENA5YDR038C 3276 nt3.35□□□□□ -1.87
RPN11P43588 NDC80YIL144W 2076 nt3.34□□□□□ -1.87
RPN11P43588 PBP4YDL053C 558 nt3.34□□□□□ -1.87
RPN11P43588 YDR461C-AYDR461C-A 243 nt3.34□□□□□ -1.87
RPN11P43588 YEL032C-AYEL032C-A 162 nt3.34□□□□□ -1.87
RPN11P43588 YGR121W-AYGR121W-A 216 nt3.34□□□□□ -1.87
RPN11P43588 VMA10YHR039C-A 345 nt3.34□□□□□ -1.87
RPN11P43588 YIL141WYIL141W 390 nt3.34□□□□□ -1.87
RPN11P43588 PSY1YKL076C 384 nt3.34□□□□□ -1.87
RPN11P43588 IES3YLR052W 753 nt3.34□□□□□ -1.87
RPN11P43588 NYV1YLR093C 762 nt3.34□□□□□ -1.87
RPN11P43588 RPN13YLR421C 471 nt3.34□□□□□ -1.87
RPN11P43588 SUS1YBR111W-A 291 nt3.34□□□□□ -1.87
RPN11P43588 YBR201C-AYBR201C-A 204 nt3.34□□□□□ -1.87
RPN11P43588 YFL002W-BYFL002W-B 1317 nt3.34□□□□□ -1.87
RPN11P43588 YGR161W-AYGR161W-A 1317 nt3.34□□□□□ -1.87
RPN11P43588 YBL100W-AYBL100W-A 1317 nt3.34□□□□□ -1.87
RPN11P43588 YCL020WYCL020W 1317 nt3.34□□□□□ -1.87
RPN11P43588 VAC14YLR386W 2643 nt3.34□□□□□ -1.88
RPN11P43588 MYO3YKL129C 3819 nt3.34□□□□□ -1.88
RPN11P43588 TFC4YGR047C 3078 nt3.33□□□□□ -1.88
RPN11P43588 SSQ1YLR369W 1974 nt3.33□□□□□ -1.88
RPN11P43588 MIT1YEL007W 2001 nt3.33□□□□□ -1.88
RPN11P43588 YCR013CYCR013C 648 nt3.33□□□□□ -1.88
RPN11P43588 snR9snR9 187 nt3.33□□□□□ -1.88
RPN11P43588 YGR039WYGR039W 312 nt3.33□□□□□ -1.88
RPN11P43588 YGR293CYGR293C 462 nt3.33□□□□□ -1.88
RPN11P43588 YJL119CYJL119C 324 nt3.33□□□□□ -1.88
RPN11P43588 RBL2YOR265W 321 nt3.33□□□□□ -1.88
RPN11P43588 CSM4YPL200W 471 nt3.33□□□□□ -1.88
RPN11P43588 YBR300CYBR300C 498 nt3.33□□□□□ -1.88
RPN11P43588 YDR089WYDR089W 2610 nt3.33□□□□□ -1.88
RPN11P43588 STP2YHR006W 1626 nt3.33□□□□□ -1.88
RPN11P43588 HDA2YDR295C 2025 nt3.32□□□□□ -1.88
RPN11P43588 PDX1YGR193C 1233 nt3.32□□□□□ -1.88
RPN11P43588 JIP3YLR331C 378 nt3.32□□□□□ -1.88
RPN11P43588 RPL6BYLR448W 531 nt3.32□□□□□ -1.88
RPN11P43588 MPD2YOL088C 834 nt3.32□□□□□ -1.88
RPN11P43588 MIX23YBL107C 591 nt3.32□□□□□ -1.88
RPN11P43588 VAM10YOR068C 345 nt3.32□□□□□ -1.88
RPN11P43588 RCN2YOR220W 798 nt3.32□□□□□ -1.88
RPN11P43588 YPR170CYPR170C 336 nt3.32□□□□□ -1.88
RPN11P43588 CCT7YJL111W 1653 nt3.32□□□□□ -1.88
RPN11P43588 MDM36YPR083W 1740 nt3.32□□□□□ -1.88
RPN11P43588 BAR1YIL015W 1764 nt3.32□□□□□ -1.88
RPN11P43588 SLP1YOR154W 1764 nt3.32□□□□□ -1.88
RPN11P43588 SYO1YDL063C 1863 nt3.32□□□□□ -1.88
RPN11P43588 FUS2YMR232W 2034 nt3.32□□□□□ -1.88
RPN11P43588 CHS2YBR038W 2892 nt3.32□□□□□ -1.88
RPN11P43588 YEL025CYEL025C 3567 nt3.32□□□□□ -1.88
RPN11P43588 YDR149CYDR149C 708 nt3.31□□□□□ -1.88
RPN11P43588 YDR320W-BYDR320W-B 138 nt3.31□□□□□ -1.88
RPN11P43588 THG1YGR024C 714 nt3.31□□□□□ -1.88
RPN11P43588 VMA21YGR105W 234 nt3.31□□□□□ -1.88
RPN11P43588 PRS3YHL011C 963 nt3.31□□□□□ -1.88
RPN11P43588 SDL1YIL167W 633 nt3.31□□□□□ -1.88
RPN11P43588 YET1YKL065C 621 nt3.31□□□□□ -1.88
RPN11P43588 GAL7YBR018C 1101 nt3.31□□□□□ -1.88
RPN11P43588 MEI5YPL121C 669 nt3.31□□□□□ -1.88
RPN11P43588 MRPS9YBR146W 837 nt3.31□□□□□ -1.88
RPN11P43588 ITT1YML068W 1395 nt3.3□□□□□ -1.88
RPN11P43588 YDR262WYDR262W 819 nt3.3□□□□□ -1.88
RPN11P43588 PUG1YER185W 912 nt3.3□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 44.9 ms