Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 RDN5-1RDN5-1 121 nt4.04□□□□□ -1.76
DEF1P35732 RDN5-6RDN5-6 121 nt4.04□□□□□ -1.76
DEF1P35732 PDR17YNL264C 1053 nt4.04□□□□□ -1.76
DEF1P35732 GDT1YBR187W 843 nt4.04□□□□□ -1.76
DEF1P35732 DER1YBR201W 636 nt4.04□□□□□ -1.76
DEF1P35732 SLM2YNL047C 1971 nt4.03□□□□□ -1.76
DEF1P35732 YDL180WYDL180W 1644 nt4.03□□□□□ -1.76
DEF1P35732 SKN7YHR206W 1869 nt4.03□□□□□ -1.76
DEF1P35732 HNT1YDL125C 477 nt4.03□□□□□ -1.76
DEF1P35732 YDL242WYDL242W 354 nt4.03□□□□□ -1.76
DEF1P35732 SEC53YFL045C 765 nt4.03□□□□□ -1.76
DEF1P35732 AAD16YFL057C 459 nt4.03□□□□□ -1.76
DEF1P35732 LIF1YGL090W 1266 nt4.03□□□□□ -1.76
DEF1P35732 tQ(UUG)CtQ(UUG)C 72 nt4.03□□□□□ -1.76
DEF1P35732 tQ(UUG)D1tQ(UUG)D1 72 nt4.03□□□□□ -1.76
DEF1P35732 tQ(UUG)D2tQ(UUG)D2 72 nt4.03□□□□□ -1.76
DEF1P35732 tQ(UUG)D3tQ(UUG)D3 72 nt4.03□□□□□ -1.76
DEF1P35732 tQ(UUG)E1tQ(UUG)E1 72 nt4.03□□□□□ -1.76
DEF1P35732 tQ(UUG)HtQ(UUG)H 72 nt4.03□□□□□ -1.76
DEF1P35732 tQ(UUG)LtQ(UUG)L 72 nt4.03□□□□□ -1.76
DEF1P35732 YIR020CYIR020C 303 nt4.03□□□□□ -1.76
DEF1P35732 YKL044WYKL044W 321 nt4.03□□□□□ -1.76
DEF1P35732 YKL066WYKL066W 444 nt4.03□□□□□ -1.76
DEF1P35732 PIN3YPR154W 648 nt4.03□□□□□ -1.76
DEF1P35732 TFB2YPL122C 1542 nt4.03□□□□□ -1.76
DEF1P35732 MNR2YKL064W 2910 nt4.03□□□□□ -1.76
DEF1P35732 SPO71YDR104C 3738 nt4.03□□□□□ -1.77
DEF1P35732 YBP2YGL060W 1926 nt4.02□□□□□ -1.77
DEF1P35732 DPB4YDR121W 591 nt4.02□□□□□ -1.77
DEF1P35732 OSH3YHR073W 2991 nt4.02□□□□□ -1.77
DEF1P35732 CFD1YIL003W 882 nt4.02□□□□□ -1.77
DEF1P35732 LSM1YJL124C 519 nt4.02□□□□□ -1.77
DEF1P35732 CSE4YKL049C 690 nt4.02□□□□□ -1.77
DEF1P35732 YKL065W-AYKL065W-A 222 nt4.02□□□□□ -1.77
DEF1P35732 COQ5YML110C 924 nt4.02□□□□□ -1.77
DEF1P35732 TMC1YOR052C 453 nt4.02□□□□□ -1.77
DEF1P35732 DOA4YDR069C 2781 nt4.02□□□□□ -1.77
DEF1P35732 VHR1YIL056W 1923 nt4.01□□□□□ -1.77
DEF1P35732 SPA2YLL021W 4401 nt4.01□□□□□ -1.77
DEF1P35732 MSK1YNL073W 1731 nt4.01□□□□□ -1.77
DEF1P35732 RAD5YLR032W 3510 nt4.01□□□□□ -1.77
DEF1P35732 YDL152WYDL152W 366 nt4.01□□□□□ -1.77
DEF1P35732 GCN4YEL009C 846 nt4.01□□□□□ -1.77
DEF1P35732 CRG1YHR209W 876 nt4.01□□□□□ -1.77
DEF1P35732 PDP3YLR455W 915 nt4.01□□□□□ -1.77
DEF1P35732 YML009C-AYML009C-A 327 nt4.01□□□□□ -1.77
DEF1P35732 RIO2YNL207W 1278 nt4.01□□□□□ -1.77
DEF1P35732 BMS1YPL217C 3552 nt4.01□□□□□ -1.77
DEF1P35732 PAM1YDR251W 2493 nt4.01□□□□□ -1.77
DEF1P35732 USA1YML029W 2517 nt4□□□□□ -1.77
DEF1P35732 CTR86YCR054C 1692 nt4□□□□□ -1.77
DEF1P35732 MAK21YDR060W 3078 nt4□□□□□ -1.77
DEF1P35732 EXO5YBR163W 1758 nt4□□□□□ -1.77
DEF1P35732 YDL228CYDL228C 642 nt4□□□□□ -1.77
DEF1P35732 YDR115WYDR115W 318 nt4□□□□□ -1.77
DEF1P35732 SLD5YDR489W 885 nt4□□□□□ -1.77
DEF1P35732 Q0092Q0092 141 nt4□□□□□ -1.77
DEF1P35732 YGL039WYGL039W 1047 nt4□□□□□ -1.77
DEF1P35732 GOS1YHL031C 672 nt4□□□□□ -1.77
DEF1P35732 YHL037CYHL037C 402 nt4□□□□□ -1.77
DEF1P35732 YIR020C-BYIR020C-B 735 nt4□□□□□ -1.77
DEF1P35732 ANB1YJR047C 474 nt4□□□□□ -1.77
DEF1P35732 AFB1YLR040C 675 nt4□□□□□ -1.77
DEF1P35732 BSC3YLR465C 309 nt4□□□□□ -1.77
DEF1P35732 AIM32YML050W 936 nt4□□□□□ -1.77
DEF1P35732 YBR076C-AYBR076C-A 267 nt4□□□□□ -1.77
DEF1P35732 ARR2YPR200C 393 nt4□□□□□ -1.77
DEF1P35732 IOC3YFR013W 2364 nt4□□□□□ -1.77
DEF1P35732 RCY1YJL204C 2523 nt4□□□□□ -1.77
DEF1P35732 HDA2YDR295C 2025 nt4□□□□□ -1.77
DEF1P35732 CAF130YGR134W 3369 nt4□□□□□ -1.77
DEF1P35732 STE24YJR117W 1362 nt4□□□□□ -1.77
DEF1P35732 SLY41YOR307C 1362 nt4□□□□□ -1.77
DEF1P35732 MSR1YHR091C 1932 nt3.99□□□□□ -1.77
DEF1P35732 SMP3YOR149C 1551 nt3.99□□□□□ -1.77
DEF1P35732 YGL108CYGL108C 423 nt3.99□□□□□ -1.77
DEF1P35732 MRM2YGL136C 963 nt3.99□□□□□ -1.77
DEF1P35732 YGR190CYGR190C 366 nt3.99□□□□□ -1.77
DEF1P35732 YJR038CYJR038C 363 nt3.99□□□□□ -1.77
DEF1P35732 MRPL31YKL138C 396 nt3.99□□□□□ -1.77
DEF1P35732 MRPL20YKR085C 588 nt3.99□□□□□ -1.77
DEF1P35732 HTA2YBL003C 399 nt3.99□□□□□ -1.77
DEF1P35732 OST6YML019W 999 nt3.99□□□□□ -1.77
DEF1P35732 YBL065WYBL065W 345 nt3.99□□□□□ -1.77
DEF1P35732 YJR098CYJR098C 1971 nt3.99□□□□□ -1.77
DEF1P35732 AEP3YPL005W 1821 nt3.99□□□□□ -1.77
DEF1P35732 SPC105YGL093W 2754 nt3.98□□□□□ -1.77
DEF1P35732 NHP2YDL208W 471 nt3.98□□□□□ -1.77
DEF1P35732 FMN1YDR236C 657 nt3.98□□□□□ -1.77
DEF1P35732 SPG3YDR504C 384 nt3.98□□□□□ -1.77
DEF1P35732 YEL032C-AYEL032C-A 162 nt3.98□□□□□ -1.77
DEF1P35732 YEL057CYEL057C 702 nt3.98□□□□□ -1.77
DEF1P35732 YIL024CYIL024C 570 nt3.98□□□□□ -1.77
DEF1P35732 PIR1YKL164C 1026 nt3.98□□□□□ -1.77
DEF1P35732 YLR294CYLR294C 330 nt3.98□□□□□ -1.77
DEF1P35732 SUI1YNL244C 327 nt3.98□□□□□ -1.77
DEF1P35732 YOL134CYOL134C 390 nt3.98□□□□□ -1.77
DEF1P35732 NSL1YPL233W 651 nt3.98□□□□□ -1.77
DEF1P35732 ENA5YDR038C 3276 nt3.98□□□□□ -1.77
DEF1P35732 RPN1YHR027C 2982 nt3.98□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 68.7 ms