Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 YPR097WYPR097W 3222 nt2.03□□□□□ -2.08
TY1B-PR2P0C2J0 URC2YDR520C 2319 nt2.03□□□□□ -2.08
TY1B-PR2P0C2J0 LHS1YKL073W 2646 nt2.03□□□□□ -2.08
TY1B-PR2P0C2J0 BUR6YER159C 429 nt2.03□□□□□ -2.09
TY1B-PR2P0C2J0 MTR2YKL186C 555 nt2.03□□□□□ -2.09
TY1B-PR2P0C2J0 HAL1YPR005C 885 nt2.03□□□□□ -2.09
TY1B-PR2P0C2J0 RRP14YKL082C 1305 nt2.02□□□□□ -2.09
TY1B-PR2P0C2J0 MLP2YIL149C 5040 nt2.01□□□□□ -2.09
TY1B-PR2P0C2J0 PLC1YPL268W 2610 nt2.01□□□□□ -2.09
TY1B-PR2P0C2J0 UTP25YIL091C 2166 nt2.01□□□□□ -2.09
TY1B-PR2P0C2J0 YFL002W-AYFL002W-A 5313 nt2.01□□□□□ -2.09
TY1B-PR2P0C2J0 YGR161W-BYGR161W-B 5313 nt2.01□□□□□ -2.09
TY1B-PR2P0C2J0 YLR410W-BYLR410W-B 5313 nt2.01□□□□□ -2.09
TY1B-PR2P0C2J0 YCL019WYCL019W 5313 nt2.01□□□□□ -2.09
TY1B-PR2P0C2J0 ARR2YPR200C 393 nt2.01□□□□□ -2.09
TY1B-PR2P0C2J0 INA22YIR024C 651 nt2□□□□□ -2.09
TY1B-PR2P0C2J0 SHE9YDR393W 1371 nt2□□□□□ -2.09
TY1B-PR2P0C2J0 YIR014WYIR014W 729 nt2□□□□□ -2.09
TY1B-PR2P0C2J0 RPS29AYLR388W 171 nt2□□□□□ -2.09
TY1B-PR2P0C2J0 YLR416CYLR416C 399 nt2□□□□□ -2.09
TY1B-PR2P0C2J0 SLM1YIL105C 2061 nt2□□□□□ -2.09
TY1B-PR2P0C2J0 UTP5YDR398W 1932 nt1.99□□□□□ -2.09
TY1B-PR2P0C2J0 YHR180W-AYHR180W-A 183 nt1.99□□□□□ -2.09
TY1B-PR2P0C2J0 TSR4YOL022C 1227 nt1.99□□□□□ -2.09
TY1B-PR2P0C2J0 POL5YEL055C 3069 nt1.99□□□□□ -2.09
TY1B-PR2P0C2J0 MDM32YOR147W 1869 nt1.99□□□□□ -2.09
TY1B-PR2P0C2J0 UFD2YDL190C 2886 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 SPC98YNL126W 2541 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 VHR1YIL056W 1923 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 AGC1YPR021C 2709 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 SRD1YCR018C 666 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 YDR169C-AYDR169C-A 150 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 YKR011CYKR011C 1062 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 YLR154W-AYLR154W-A 186 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 YLR224WYLR224W 1110 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 TRM112YNR046W 408 nt1.98□□□□□ -2.09
TY1B-PR2P0C2J0 UTP13YLR222C 2454 nt1.97□□□□□ -2.09
TY1B-PR2P0C2J0 RPL1BYGL135W 654 nt1.97□□□□□ -2.09
TY1B-PR2P0C2J0 CSE4YKL049C 690 nt1.97□□□□□ -2.09
TY1B-PR2P0C2J0 RPL1AYPL220W 654 nt1.97□□□□□ -2.09
TY1B-PR2P0C2J0 MBA1YBR185C 837 nt1.97□□□□□ -2.09
TY1B-PR2P0C2J0 DIA2YOR080W 2199 nt1.97□□□□□ -2.09
TY1B-PR2P0C2J0 REV1YOR346W 2958 nt1.96□□□□□ -2.1
TY1B-PR2P0C2J0 YRR1YOR162C 2433 nt1.96□□□□□ -2.1
TY1B-PR2P0C2J0 UTP20YBL004W 7482 nt1.96□□□□□ -2.1
TY1B-PR2P0C2J0 CTH1YDR151C 978 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 BUR2YLR226W 1188 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 CTR86YCR054C 1692 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 PUF2YPR042C 3228 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 GRX3YDR098C 858 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 WBP1YEL002C 1293 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 SNO3YFL060C 669 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 tQ(UUG)E2tQ(UUG)E2 72 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 SEN15YMR059W 387 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 SNO2YNL334C 669 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 HHF1YBR009C 312 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 YDR034C-DYDR034C-D 5313 nt1.95□□□□□ -2.1
TY1B-PR2P0C2J0 ALG11YNL048W 1647 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 NEM1YHR004C 1341 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 YLR035C-AYLR035C-A 3468 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 tF(GAA)BtF(GAA)B 73 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 tF(GAA)FtF(GAA)F 73 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 tF(GAA)GtF(GAA)G 73 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 tF(GAA)H1tF(GAA)H1 73 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 tF(GAA)H2tF(GAA)H2 73 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 tF(GAA)MtF(GAA)M 73 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 tF(GAA)P1tF(GAA)P1 73 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 tF(GAA)P2tF(GAA)P2 73 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 YER085CYER085C 522 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 MMS22YLR320W 4365 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 RGP1YDR137W 1992 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 YDR179W-AYDR179W-A 1392 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 MED1YPR070W 1701 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 VPS38YLR360W 1320 nt1.94□□□□□ -2.1
TY1B-PR2P0C2J0 PET100YDR079W 336 nt1.93□□□□□ -2.1
TY1B-PR2P0C2J0 EAF7YNL136W 1278 nt1.93□□□□□ -2.1
TY1B-PR2P0C2J0 VPS15YBR097W 4365 nt1.93□□□□□ -2.1
TY1B-PR2P0C2J0 YJR061WYJR061W 2808 nt1.93□□□□□ -2.1
TY1B-PR2P0C2J0 INP1YMR204C 1263 nt1.93□□□□□ -2.1
TY1B-PR2P0C2J0 CRS5YOR031W 210 nt1.93□□□□□ -2.1
TY1B-PR2P0C2J0 HOP1YIL072W 1818 nt1.92□□□□□ -2.1
TY1B-PR2P0C2J0 NPL4YBR170C 1743 nt1.92□□□□□ -2.1
TY1B-PR2P0C2J0 HFM1YGL251C 3564 nt1.92□□□□□ -2.1
TY1B-PR2P0C2J0 ALG8YOR067C 1734 nt1.92□□□□□ -2.1
TY1B-PR2P0C2J0 AFI1YOR129C 2682 nt1.91□□□□□ -2.1
TY1B-PR2P0C2J0 RRF1YHR038W 693 nt1.91□□□□□ -2.1
TY1B-PR2P0C2J0 CYC2YOR037W 1101 nt1.91□□□□□ -2.1
TY1B-PR2P0C2J0 YHR214C-CYHR214C-C 1437 nt1.91□□□□□ -2.1
TY1B-PR2P0C2J0 YCK2YNL154C 1641 nt1.9□□□□□ -2.1
TY1B-PR2P0C2J0 YGR160WYGR160W 612 nt1.9□□□□□ -2.1
TY1B-PR2P0C2J0 EST3YIL009C-A 546 nt1.9□□□□□ -2.1
TY1B-PR2P0C2J0 SUB1YMR039C 879 nt1.9□□□□□ -2.1
TY1B-PR2P0C2J0 YOL166CYOL166C 339 nt1.9□□□□□ -2.1
TY1B-PR2P0C2J0 MRPL9YGR220C 810 nt1.9□□□□□ -2.11
TY1B-PR2P0C2J0 YIL156W-AYIL156W-A 402 nt1.9□□□□□ -2.11
TY1B-PR2P0C2J0 YIR017W-AYIR017W-A 600 nt1.9□□□□□ -2.11
TY1B-PR2P0C2J0 YIR043CYIR043C 693 nt1.9□□□□□ -2.11
TY1B-PR2P0C2J0 RMP1YLR145W 606 nt1.9□□□□□ -2.11
TY1B-PR2P0C2J0 MRPL27YBR282W 441 nt1.9□□□□□ -2.11
TY1B-PR2P0C2J0 GRX1YCL035C 333 nt1.9□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 165.5 ms