Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL1A2P08123 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL1A2P08123 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL1A2P08123 MCRIP2P1-201ENST00000394346 511 ntBASIC23■■□□□ 1.27
COL1A2P08123 LSM12P1-201ENST00000411836 588 ntBASIC23■■□□□ 1.27
COL1A2P08123 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23■■□□□ 1.27
COL1A2P08123 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23■■□□□ 1.27
COL1A2P08123 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23■■□□□ 1.27
COL1A2P08123 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23■■□□□ 1.27
COL1A2P08123 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL1A2P08123 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
COL1A2P08123 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL1A2P08123 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL1A2P08123 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.99■■□□□ 1.27
COL1A2P08123 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
COL1A2P08123 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.99■■□□□ 1.27
COL1A2P08123 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL1A2P08123 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL1A2P08123 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.99■■□□□ 1.27
COL1A2P08123 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
COL1A2P08123 RNA5SP413-201ENST00000516373 109 ntBASIC22.99■■□□□ 1.27
COL1A2P08123 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.99■■□□□ 1.27
COL1A2P08123 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.99■■□□□ 1.27
COL1A2P08123 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL1A2P08123 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.98■■□□□ 1.27
COL1A2P08123 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.98■■□□□ 1.27
COL1A2P08123 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL1A2P08123 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL1A2P08123 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.98■■□□□ 1.27
COL1A2P08123 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL1A2P08123 AL355472.2-201ENST00000422958 438 ntBASIC22.98■■□□□ 1.27
COL1A2P08123 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.98■■□□□ 1.27
COL1A2P08123 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.98■■□□□ 1.27
COL1A2P08123 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.98■■□□□ 1.27
COL1A2P08123 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL1A2P08123 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.98■■□□□ 1.27
COL1A2P08123 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL1A2P08123 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL1A2P08123 TMEM191A-211ENST00000637163 1067 ntBASIC22.98■■□□□ 1.27
COL1A2P08123 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL1A2P08123 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL1A2P08123 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A2P08123 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.97■■□□□ 1.27
COL1A2P08123 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A2P08123 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A2P08123 KRT17P1-201ENST00000399211 1546 ntBASIC22.97■■□□□ 1.27
COL1A2P08123 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A2P08123 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.97■■□□□ 1.27
COL1A2P08123 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A2P08123 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.97■■□□□ 1.27
COL1A2P08123 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.97■■□□□ 1.27
COL1A2P08123 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.97■■□□□ 1.27
COL1A2P08123 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL1A2P08123 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.97■■□□□ 1.27
COL1A2P08123 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A2P08123 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A2P08123 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.96■■□□□ 1.27
COL1A2P08123 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A2P08123 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A2P08123 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL1A2P08123 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
COL1A2P08123 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.96■■□□□ 1.27
COL1A2P08123 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.96■■□□□ 1.27
COL1A2P08123 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
COL1A2P08123 AC116050.2-201ENST00000612102 1779 ntBASIC22.95■■□□□ 1.26
COL1A2P08123 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
COL1A2P08123 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL1A2P08123 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.95■■□□□ 1.26
COL1A2P08123 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.95■■□□□ 1.26
COL1A2P08123 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
COL1A2P08123 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.95■■□□□ 1.26
COL1A2P08123 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.95■■□□□ 1.26
COL1A2P08123 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL1A2P08123 AL589743.5-201ENST00000616611 1050 ntBASIC22.95■■□□□ 1.26
COL1A2P08123 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.95■■□□□ 1.26
COL1A2P08123 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL1A2P08123 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.95■■□□□ 1.26
COL1A2P08123 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL1A2P08123 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.95■■□□□ 1.26
COL1A2P08123 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.95■■□□□ 1.26
COL1A2P08123 AC012676.1-201ENST00000574705 1949 ntBASIC22.95■■□□□ 1.26
COL1A2P08123 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A2P08123 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A2P08123 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A2P08123 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A2P08123 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A2P08123 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.94■■□□□ 1.26
COL1A2P08123 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.94■■□□□ 1.26
COL1A2P08123 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.94■■□□□ 1.26
COL1A2P08123 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A2P08123 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
COL1A2P08123 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A2P08123 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.94■■□□□ 1.26
COL1A2P08123 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.94■■□□□ 1.26
COL1A2P08123 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A2P08123 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL1A2P08123 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL1A2P08123 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL1A2P08123 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL1A2P08123 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 395.7 ms