Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.37■■□□□ 1.49
EFCC1Q9HA90 AL162412.1-201ENST00000567129 965 ntBASIC24.37■■□□□ 1.49
EFCC1Q9HA90 AL591742.1-201ENST00000604433 565 ntBASIC24.37■■□□□ 1.49
EFCC1Q9HA90 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.37■■□□□ 1.49
EFCC1Q9HA90 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.37■■□□□ 1.49
EFCC1Q9HA90 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.37■■□□□ 1.49
EFCC1Q9HA90 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 RPPH1-201ENST00000516869 333 ntBASIC24.36■■□□□ 1.49
EFCC1Q9HA90 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
EFCC1Q9HA90 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC24.35■■□□□ 1.49
EFCC1Q9HA90 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 LSM12P1-201ENST00000411836 588 ntBASIC24.34■■□□□ 1.49
EFCC1Q9HA90 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 SNORA78-201ENST00000459373 127 ntBASIC24.34■■□□□ 1.49
EFCC1Q9HA90 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 AC008403.3-201ENST00000598924 454 ntBASIC24.34■■□□□ 1.49
EFCC1Q9HA90 Z99916.2-201ENST00000604037 246 ntBASIC24.34■■□□□ 1.49
EFCC1Q9HA90 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.34■■□□□ 1.49
EFCC1Q9HA90 AL121603.2-201ENST00000557373 2117 ntBASIC24.34■■□□□ 1.49
EFCC1Q9HA90 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 KRT18P21-201ENST00000515767 1272 ntBASIC24.33■■□□□ 1.49
EFCC1Q9HA90 C1QBPP2-201ENST00000528754 825 ntBASIC24.33■■□□□ 1.49
EFCC1Q9HA90 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 AC008175.2-201ENST00000612840 297 ntBASIC24.33■■□□□ 1.49
EFCC1Q9HA90 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
EFCC1Q9HA90 AC137767.1-201ENST00000602918 1920 ntBASIC24.33■■□□□ 1.49
EFCC1Q9HA90 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
EFCC1Q9HA90 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
EFCC1Q9HA90 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
EFCC1Q9HA90 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
EFCC1Q9HA90 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
EFCC1Q9HA90 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
EFCC1Q9HA90 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
EFCC1Q9HA90 SLC25A24-204ENST00000569674 2357 ntBASIC24.32■■□□□ 1.48
EFCC1Q9HA90 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
EFCC1Q9HA90 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
EFCC1Q9HA90 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.32■■□□□ 1.48
EFCC1Q9HA90 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
EFCC1Q9HA90 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
EFCC1Q9HA90 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
EFCC1Q9HA90 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
EFCC1Q9HA90 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC24.31■■□□□ 1.48
EFCC1Q9HA90 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms