Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 YET1YKL065C 621 nt3.96□□□□□ -1.78
UBP12P39538 CSM4YPL200W 471 nt3.96□□□□□ -1.78
UBP12P39538 RPS23BYPR132W 438 nt3.96□□□□□ -1.78
UBP12P39538 CUR1YPR158W 759 nt3.96□□□□□ -1.78
UBP12P39538 MFB1YDR219C 1398 nt3.96□□□□□ -1.78
UBP12P39538 RPN2YIL075C 2838 nt3.96□□□□□ -1.78
UBP12P39538 YCG1YDR325W 3108 nt3.96□□□□□ -1.78
UBP12P39538 DAD1YDR016C 285 nt3.95□□□□□ -1.78
UBP12P39538 MVB12YGR206W 306 nt3.95□□□□□ -1.78
UBP12P39538 COX23YHR116W 456 nt3.95□□□□□ -1.78
UBP12P39538 RSM19YNR037C 276 nt3.95□□□□□ -1.78
UBP12P39538 AFT2YPL202C 1251 nt3.95□□□□□ -1.78
UBP12P39538 NIP7YPL211W 546 nt3.95□□□□□ -1.78
UBP12P39538 ASI3YNL008C 2031 nt3.94□□□□□ -1.78
UBP12P39538 snR5snR5 204 nt3.94□□□□□ -1.78
UBP12P39538 CDC26YFR036W 375 nt3.94□□□□□ -1.78
UBP12P39538 GMC2YLR445W 567 nt3.94□□□□□ -1.78
UBP12P39538 VMA6YLR447C 1038 nt3.94□□□□□ -1.78
UBP12P39538 HHF2YNL030W 312 nt3.94□□□□□ -1.78
UBP12P39538 ATX1YNL259C 222 nt3.94□□□□□ -1.78
UBP12P39538 PDR17YNL264C 1053 nt3.94□□□□□ -1.78
UBP12P39538 SET1YHR119W 3243 nt3.93□□□□□ -1.78
UBP12P39538 HOP1YIL072W 1818 nt3.93□□□□□ -1.78
UBP12P39538 YFR054CYFR054C 579 nt3.93□□□□□ -1.78
UBP12P39538 COG2YGR120C 789 nt3.93□□□□□ -1.78
UBP12P39538 SRP21YKL122C 504 nt3.93□□□□□ -1.78
UBP12P39538 MRPL16YBL038W 699 nt3.93□□□□□ -1.78
UBP12P39538 RPL13BYMR142C 600 nt3.93□□□□□ -1.78
UBP12P39538 YPL142CYPL142C 318 nt3.93□□□□□ -1.78
UBP12P39538 MRPL40YPL173W 894 nt3.93□□□□□ -1.78
UBP12P39538 RPA135YPR010C 3612 nt3.92□□□□□ -1.78
UBP12P39538 XRN1YGL173C 4587 nt3.92□□□□□ -1.78
UBP12P39538 EMI1YDR512C 564 nt3.92□□□□□ -1.78
UBP12P39538 PCL5YHR071W 690 nt3.92□□□□□ -1.78
UBP12P39538 REC8YPR007C 2043 nt3.92□□□□□ -1.78
UBP12P39538 MDN1YLR106C 14733 nt3.92□□□□□ -1.78
UBP12P39538 NOP4YPL043W 2058 nt3.91□□□□□ -1.78
UBP12P39538 snR9snR9 187 nt3.91□□□□□ -1.78
UBP12P39538 YDR029WYDR029W 315 nt3.91□□□□□ -1.78
UBP12P39538 PEX10YDR265W 1014 nt3.91□□□□□ -1.78
UBP12P39538 MIG3YER028C 1185 nt3.91□□□□□ -1.78
UBP12P39538 VEL1YGL258W 621 nt3.91□□□□□ -1.78
UBP12P39538 YJL169WYJL169W 369 nt3.91□□□□□ -1.78
UBP12P39538 SHH3YMR118C 591 nt3.91□□□□□ -1.78
UBP12P39538 YBR071WYBR071W 636 nt3.91□□□□□ -1.78
UBP12P39538 NOP12YOL041C 1380 nt3.9□□□□□ -1.78
UBP12P39538 ARO1YDR127W 4767 nt3.9□□□□□ -1.78
UBP12P39538 MNT3YIL014W 1893 nt3.9□□□□□ -1.78
UBP12P39538 VPS3YDR495C 3036 nt3.9□□□□□ -1.78
UBP12P39538 STE23YLR389C 3084 nt3.9□□□□□ -1.78
UBP12P39538 TGL3YMR313C 1929 nt3.9□□□□□ -1.78
UBP12P39538 STI1YOR027W 1770 nt3.9□□□□□ -1.79
UBP12P39538 MIC19YFR011C 513 nt3.9□□□□□ -1.79
UBP12P39538 RPL11BYGR085C 525 nt3.9□□□□□ -1.79
UBP12P39538 YJR087WYJR087W 351 nt3.9□□□□□ -1.79
UBP12P39538 YMR254CYMR254C 309 nt3.9□□□□□ -1.79
UBP12P39538 PFY1YOR122C 381 nt3.9□□□□□ -1.79
UBP12P39538 TUM1YOR251C 915 nt3.9□□□□□ -1.79
UBP12P39538 RPL11AYPR102C 525 nt3.9□□□□□ -1.79
UBP12P39538 YPR170CYPR170C 336 nt3.9□□□□□ -1.79
UBP12P39538 YBR300CYBR300C 498 nt3.9□□□□□ -1.79
UBP12P39538 KHA1YJL094C 2622 nt3.9□□□□□ -1.79
UBP12P39538 CTF13YMR094W 1437 nt3.89□□□□□ -1.79
UBP12P39538 URB2YJR041C 3525 nt3.89□□□□□ -1.79
UBP12P39538 PRS3YHL011C 963 nt3.89□□□□□ -1.79
UBP12P39538 LRP1YHR081W 555 nt3.89□□□□□ -1.79
UBP12P39538 YIL046W-AYIL046W-A 165 nt3.89□□□□□ -1.79
UBP12P39538 ASG7YJL170C 630 nt3.89□□□□□ -1.79
UBP12P39538 YAL031W-AYAL031W-A 309 nt3.89□□□□□ -1.79
UBP12P39538 IRC21YMR073C 606 nt3.89□□□□□ -1.79
UBP12P39538 RPS16AYMR143W 432 nt3.89□□□□□ -1.79
UBP12P39538 MPP6YNR024W 561 nt3.89□□□□□ -1.79
UBP12P39538 YDR338CYDR338C 2088 nt3.88□□□□□ -1.79
UBP12P39538 YDL163WYDL163W 303 nt3.88□□□□□ -1.79
UBP12P39538 YDR018CYDR018C 1191 nt3.88□□□□□ -1.79
UBP12P39538 YHR214C-DYHR214C-D 294 nt3.88□□□□□ -1.79
UBP12P39538 APQ13YJL075C 417 nt3.88□□□□□ -1.79
UBP12P39538 RLP24YLR009W 600 nt3.88□□□□□ -1.79
UBP12P39538 YLR202CYLR202C 327 nt3.88□□□□□ -1.79
UBP12P39538 YAR069CYAR069C 294 nt3.88□□□□□ -1.79
UBP12P39538 YNL109WYNL109W 546 nt3.88□□□□□ -1.79
UBP12P39538 YPL107WYPL107W 747 nt3.88□□□□□ -1.79
UBP12P39538 snR42snR42 351 nt3.88□□□□□ -1.79
UBP12P39538 YMR317WYMR317W 3423 nt3.88□□□□□ -1.79
UBP12P39538 YJL132WYJL132W 2253 nt3.88□□□□□ -1.79
UBP12P39538 MET10YFR030W 3108 nt3.88□□□□□ -1.79
UBP12P39538 STP2YHR006W 1626 nt3.88□□□□□ -1.79
UBP12P39538 STU2YLR045C 2667 nt3.88□□□□□ -1.79
UBP12P39538 SHS1YDL225W 1656 nt3.87□□□□□ -1.79
UBP12P39538 DNM1YLL001W 2274 nt3.87□□□□□ -1.79
UBP12P39538 ATP22YDR350C 2055 nt3.87□□□□□ -1.79
UBP12P39538 RSM24YDR175C 960 nt3.87□□□□□ -1.79
UBP12P39538 RPB9YGL070C 369 nt3.87□□□□□ -1.79
UBP12P39538 YIR020C-BYIR020C-B 735 nt3.87□□□□□ -1.79
UBP12P39538 ANB1YJR047C 474 nt3.87□□□□□ -1.79
UBP12P39538 ARC18YLR370C 537 nt3.87□□□□□ -1.79
UBP12P39538 YNL235CYNL235C 432 nt3.87□□□□□ -1.79
UBP12P39538 CSI2YOL007C 1026 nt3.87□□□□□ -1.79
UBP12P39538 YOR283WYOR283W 693 nt3.87□□□□□ -1.79
UBP12P39538 CBP2YHL038C 1893 nt3.87□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 37 ms