Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 FEM1AP4-201ENST00000443167 1987 ntBASIC15.15■□□□□ 0.02
TRGV1A0A0A0MS02 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRGV1A0A0A0MS02 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 AL024507.2-201ENST00000606070 2574 ntBASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRGV1A0A0A0MS02 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRGV1A0A0A0MS02 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 AC079140.4-201ENST00000507448 529 ntBASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 TPRG1LP1-201ENST00000598702 760 ntBASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRGV1A0A0A0MS02 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms