Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.39■□□□□ 0.85
THSD1Q9NS62 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.38■□□□□ 0.85
THSD1Q9NS62 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.38■□□□□ 0.85
THSD1Q9NS62 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
THSD1Q9NS62 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
THSD1Q9NS62 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
THSD1Q9NS62 FBXW4P1-201ENST00000426721 2239 ntBASIC20.38■□□□□ 0.85
THSD1Q9NS62 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
THSD1Q9NS62 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.38■□□□□ 0.85
THSD1Q9NS62 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
THSD1Q9NS62 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.37■□□□□ 0.85
THSD1Q9NS62 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 AC055733.4-201ENST00000638462 1354 ntBASIC20.37■□□□□ 0.85
THSD1Q9NS62 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.37■□□□□ 0.85
THSD1Q9NS62 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
THSD1Q9NS62 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.37■□□□□ 0.85
THSD1Q9NS62 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.37■□□□□ 0.85
THSD1Q9NS62 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.37■□□□□ 0.85
THSD1Q9NS62 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
THSD1Q9NS62 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.37■□□□□ 0.85
THSD1Q9NS62 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
THSD1Q9NS62 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THSD1Q9NS62 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THSD1Q9NS62 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
THSD1Q9NS62 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.36■□□□□ 0.85
THSD1Q9NS62 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THSD1Q9NS62 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.36■□□□□ 0.85
THSD1Q9NS62 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THSD1Q9NS62 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
THSD1Q9NS62 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
THSD1Q9NS62 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
THSD1Q9NS62 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THSD1Q9NS62 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
THSD1Q9NS62 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
THSD1Q9NS62 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
THSD1Q9NS62 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 MKRN4P-201ENST00000444706 1521 ntBASIC20.35■□□□□ 0.85
THSD1Q9NS62 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.35■□□□□ 0.85
THSD1Q9NS62 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.34■□□□□ 0.85
THSD1Q9NS62 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.34■□□□□ 0.85
THSD1Q9NS62 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
THSD1Q9NS62 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.34■□□□□ 0.85
THSD1Q9NS62 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THSD1Q9NS62 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THSD1Q9NS62 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
THSD1Q9NS62 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.34■□□□□ 0.85
THSD1Q9NS62 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
THSD1Q9NS62 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THSD1Q9NS62 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.34■□□□□ 0.85
THSD1Q9NS62 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THSD1Q9NS62 LINC01960-201ENST00000563759 1884 ntBASIC20.34■□□□□ 0.85
THSD1Q9NS62 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THSD1Q9NS62 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
THSD1Q9NS62 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
THSD1Q9NS62 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.34■□□□□ 0.85
THSD1Q9NS62 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
THSD1Q9NS62 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.33■□□□□ 0.85
THSD1Q9NS62 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
THSD1Q9NS62 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
THSD1Q9NS62 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
THSD1Q9NS62 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.33■□□□□ 0.85
THSD1Q9NS62 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
THSD1Q9NS62 MIPEPP3-201ENST00000412105 444 ntBASIC20.33■□□□□ 0.85
THSD1Q9NS62 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.33■□□□□ 0.85
THSD1Q9NS62 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
THSD1Q9NS62 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.33■□□□□ 0.85
THSD1Q9NS62 TERF1P5-201ENST00000477545 1207 ntBASIC20.33■□□□□ 0.85
THSD1Q9NS62 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.33■□□□□ 0.85
THSD1Q9NS62 SLC7A5P1-201ENST00000568957 537 ntBASIC20.33■□□□□ 0.85
THSD1Q9NS62 AC008694.1-202ENST00000636953 945 ntBASIC20.33■□□□□ 0.85
THSD1Q9NS62 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
THSD1Q9NS62 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
THSD1Q9NS62 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.33■□□□□ 0.84
THSD1Q9NS62 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.33■□□□□ 0.84
THSD1Q9NS62 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms