Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC28.24■■■□□ 2.11
ZC3H6P61129 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC28.24■■■□□ 2.11
ZC3H6P61129 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ZC3H6P61129 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ZC3H6P61129 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC28.24■■■□□ 2.11
ZC3H6P61129 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ZC3H6P61129 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ZC3H6P61129 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ZC3H6P61129 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC28.24■■■□□ 2.11
ZC3H6P61129 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
ZC3H6P61129 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ZC3H6P61129 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC28.24■■■□□ 2.11
ZC3H6P61129 RN7SL471P-201ENST00000580476 299 ntBASIC28.24■■■□□ 2.11
ZC3H6P61129 SPIB-206ENST00000596074 847 ntTSL 2 BASIC28.24■■■□□ 2.11
ZC3H6P61129 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC28.24■■■□□ 2.11
ZC3H6P61129 AC100791.3-201ENST00000617619 330 ntBASIC28.24■■■□□ 2.11
ZC3H6P61129 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
ZC3H6P61129 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
ZC3H6P61129 GCA-201ENST00000233612 1694 ntTSL 2 BASIC28.23■■■□□ 2.11
ZC3H6P61129 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
ZC3H6P61129 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC28.23■■■□□ 2.11
ZC3H6P61129 SNORA78-201ENST00000459373 127 ntBASIC28.23■■■□□ 2.11
ZC3H6P61129 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC28.23■■■□□ 2.11
ZC3H6P61129 AC073912.3-201ENST00000624414 853 ntBASIC28.23■■■□□ 2.11
ZC3H6P61129 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
ZC3H6P61129 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
ZC3H6P61129 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC28.22■■■□□ 2.11
ZC3H6P61129 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ZC3H6P61129 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZC3H6P61129 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZC3H6P61129 KRT17P3-201ENST00000420566 1262 ntBASIC28.22■■■□□ 2.11
ZC3H6P61129 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC28.22■■■□□ 2.11
ZC3H6P61129 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC28.22■■■□□ 2.11
ZC3H6P61129 AC092368.3-202ENST00000574180 1591 ntBASIC28.22■■■□□ 2.11
ZC3H6P61129 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ZC3H6P61129 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ZC3H6P61129 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC28.22■■■□□ 2.11
ZC3H6P61129 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ZC3H6P61129 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC28.21■■■□□ 2.11
ZC3H6P61129 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
ZC3H6P61129 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC28.21■■■□□ 2.11
ZC3H6P61129 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 AC211429.1-201ENST00000415277 523 ntBASIC28.21■■■□□ 2.11
ZC3H6P61129 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 AL589743.5-201ENST00000616611 1050 ntBASIC28.21■■■□□ 2.11
ZC3H6P61129 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
ZC3H6P61129 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ZC3H6P61129 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
ZC3H6P61129 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
ZC3H6P61129 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
ZC3H6P61129 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ZC3H6P61129 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC28.2■■■□□ 2.1
ZC3H6P61129 CDV3P1-201ENST00000471403 739 ntBASIC28.2■■■□□ 2.1
ZC3H6P61129 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC28.2■■■□□ 2.1
ZC3H6P61129 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ZC3H6P61129 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC28.2■■■□□ 2.1
ZC3H6P61129 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ZC3H6P61129 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.2■■■□□ 2.1
ZC3H6P61129 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC28.2■■■□□ 2.1
ZC3H6P61129 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
ZC3H6P61129 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.19■■■□□ 2.1
ZC3H6P61129 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H6P61129 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
ZC3H6P61129 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC28.19■■■□□ 2.1
ZC3H6P61129 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H6P61129 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H6P61129 MCRIP2P1-201ENST00000394346 511 ntBASIC28.19■■■□□ 2.1
ZC3H6P61129 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC28.19■■■□□ 2.1
ZC3H6P61129 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC28.19■■■□□ 2.1
ZC3H6P61129 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H6P61129 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC28.19■■■□□ 2.1
ZC3H6P61129 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC28.19■■■□□ 2.1
ZC3H6P61129 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC28.19■■■□□ 2.1
ZC3H6P61129 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H6P61129 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC28.19■■■□□ 2.1
ZC3H6P61129 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H6P61129 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZC3H6P61129 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H6P61129 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC28.18■■■□□ 2.1
ZC3H6P61129 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.18■■■□□ 2.1
ZC3H6P61129 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H6P61129 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
ZC3H6P61129 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H6P61129 VMO1-204ENST00000441199 741 ntTSL 2 BASIC28.18■■■□□ 2.1
ZC3H6P61129 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC28.18■■■□□ 2.1
ZC3H6P61129 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H6P61129 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H6P61129 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H6P61129 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC28.18■■■□□ 2.1
ZC3H6P61129 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
ZC3H6P61129 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC28.18■■■□□ 2.1
ZC3H6P61129 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
ZC3H6P61129 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 873.7 ms