Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 ALD4YOR374W 1560 nt8.84□□□□□ -0.99
TY1A-MR1Q04215 SPT20YOL148C 1815 nt8.84□□□□□ -0.99
TY1A-MR1Q04215 YCR102CYCR102C 1107 nt8.83□□□□□ -1
TY1A-MR1Q04215 ECM9YKR004C 1134 nt8.83□□□□□ -1
TY1A-MR1Q04215 PRM4YPL156C 855 nt8.83□□□□□ -1
TY1A-MR1Q04215 PUS9YDL036C 1389 nt8.83□□□□□ -1
TY1A-MR1Q04215 YSP3YOR003W 1437 nt8.82□□□□□ -1
TY1A-MR1Q04215 FHN1YGR131W 525 nt8.82□□□□□ -1
TY1A-MR1Q04215 COX16YJL003W 357 nt8.81□□□□□ -1
TY1A-MR1Q04215 TIF34YMR146C 1044 nt8.81□□□□□ -1
TY1A-MR1Q04215 SWP1YMR149W 861 nt8.81□□□□□ -1
TY1A-MR1Q04215 RTG1YOL067C 534 nt8.81□□□□□ -1
TY1A-MR1Q04215 INA1YLR413W 2028 nt8.8□□□□□ -1
TY1A-MR1Q04215 YJR056CYJR056C 711 nt8.8□□□□□ -1
TY1A-MR1Q04215 SGT2YOR007C 1041 nt8.8□□□□□ -1
TY1A-MR1Q04215 SLX1YBR228W 915 nt8.8□□□□□ -1
TY1A-MR1Q04215 NUF2YOL069W 1356 nt8.8□□□□□ -1
TY1A-MR1Q04215 RPC82YPR190C 1965 nt8.8□□□□□ -1
TY1A-MR1Q04215 FAF1YIL019W 1041 nt8.79□□□□□ -1
TY1A-MR1Q04215 CSI1YMR025W 888 nt8.79□□□□□ -1
TY1A-MR1Q04215 YOL107WYOL107W 1029 nt8.79□□□□□ -1
TY1A-MR1Q04215 MSA2YKR077W 1092 nt8.78□□□□□ -1
TY1A-MR1Q04215 YNL303WYNL303W 348 nt8.78□□□□□ -1
TY1A-MR1Q04215 IRC14YOR135C 342 nt8.78□□□□□ -1
TY1A-MR1Q04215 ZTA1YBR046C 1005 nt8.78□□□□□ -1
TY1A-MR1Q04215 SUT2YPR009W 807 nt8.78□□□□□ -1
TY1A-MR1Q04215 CTR1YPR124W 1221 nt8.78□□□□□ -1
TY1A-MR1Q04215 HAS1YMR290C 1518 nt8.77□□□□□ -1.01
TY1A-MR1Q04215 LIP2YLR239C 987 nt8.77□□□□□ -1.01
TY1A-MR1Q04215 OSW1YOR255W 837 nt8.77□□□□□ -1.01
TY1A-MR1Q04215 COA2YPL189C-A 207 nt8.76□□□□□ -1.01
TY1A-MR1Q04215 GAT1YFL021W 1533 nt8.75□□□□□ -1.01
TY1A-MR1Q04215 UTR1YJR049C 1593 nt8.74□□□□□ -1.01
TY1A-MR1Q04215 YNL319WYNL319W 441 nt8.74□□□□□ -1.01
TY1A-MR1Q04215 IDI1YPL117C 867 nt8.74□□□□□ -1.01
TY1A-MR1Q04215 MRS3YJL133W 945 nt8.72□□□□□ -1.01
TY1A-MR1Q04215 MCT1YOR221C 1083 nt8.71□□□□□ -1.02
TY1A-MR1Q04215 YNL115CYNL115C 1935 nt8.71□□□□□ -1.02
TY1A-MR1Q04215 YLR283WYLR283W 945 nt8.7□□□□□ -1.02
TY1A-MR1Q04215 MMS21YEL019C 804 nt8.69□□□□□ -1.02
TY1A-MR1Q04215 LSC2YGR244C 1284 nt8.69□□□□□ -1.02
TY1A-MR1Q04215 RER1YCL001W 567 nt8.69□□□□□ -1.02
TY1A-MR1Q04215 RDN25-1RDN25-1 3396 nt8.69□□□□□ -1.02
TY1A-MR1Q04215 RDN25-2RDN25-2 3396 nt8.69□□□□□ -1.02
TY1A-MR1Q04215 GAP1YKR039W 1809 nt8.68□□□□□ -1.02
TY1A-MR1Q04215 MAF1YDR005C 1188 nt8.68□□□□□ -1.02
TY1A-MR1Q04215 SAM35YHR083W 990 nt8.68□□□□□ -1.02
TY1A-MR1Q04215 YMR114CYMR114C 1107 nt8.68□□□□□ -1.02
TY1A-MR1Q04215 snR189snR189 189 nt8.68□□□□□ -1.02
TY1A-MR1Q04215 ZRT3YKL175W 1512 nt8.68□□□□□ -1.02
TY1A-MR1Q04215 TIR3YIL011W 810 nt8.67□□□□□ -1.02
TY1A-MR1Q04215 ERG12YMR208W 1332 nt8.67□□□□□ -1.02
TY1A-MR1Q04215 HUA1YGR268C 597 nt8.66□□□□□ -1.02
TY1A-MR1Q04215 PEX25YPL112C 1185 nt8.66□□□□□ -1.02
TY1A-MR1Q04215 DLD2YDL178W 1593 nt8.65□□□□□ -1.02
TY1A-MR1Q04215 YGR283CYGR283C 1026 nt8.65□□□□□ -1.02
TY1A-MR1Q04215 LYS12YIL094C 1116 nt8.65□□□□□ -1.02
TY1A-MR1Q04215 CUS2YNL286W 858 nt8.65□□□□□ -1.02
TY1A-MR1Q04215 PEX12YMR026C 1200 nt8.64□□□□□ -1.03
TY1A-MR1Q04215 VPS75YNL246W 795 nt8.64□□□□□ -1.03
TY1A-MR1Q04215 SIR2YDL042C 1689 nt8.64□□□□□ -1.03
TY1A-MR1Q04215 RRP1YDR087C 837 nt8.63□□□□□ -1.03
TY1A-MR1Q04215 PRO1YDR300C 1287 nt8.63□□□□□ -1.03
TY1A-MR1Q04215 YER147C-AYER147C-A 411 nt8.63□□□□□ -1.03
TY1A-MR1Q04215 SHH4YLR164W 507 nt8.63□□□□□ -1.03
TY1A-MR1Q04215 PZF1YPR186C 1290 nt8.63□□□□□ -1.03
TY1A-MR1Q04215 NUR1YDL089W 1455 nt8.63□□□□□ -1.03
TY1A-MR1Q04215 YDR008CYDR008C 351 nt8.62□□□□□ -1.03
TY1A-MR1Q04215 snR34snR34 203 nt8.62□□□□□ -1.03
TY1A-MR1Q04215 KDX1YKL161C 1302 nt8.61□□□□□ -1.03
TY1A-MR1Q04215 ERG29YMR134W 714 nt8.6□□□□□ -1.03
TY1A-MR1Q04215 EEB1YPL095C 1371 nt8.6□□□□□ -1.03
TY1A-MR1Q04215 YJL067WYJL067W 351 nt8.59□□□□□ -1.03
TY1A-MR1Q04215 YLR169WYLR169W 354 nt8.59□□□□□ -1.03
TY1A-MR1Q04215 BUD16YEL029C 939 nt8.58□□□□□ -1.04
TY1A-MR1Q04215 SKI6YGR195W 741 nt8.58□□□□□ -1.04
TY1A-MR1Q04215 YHR028W-AYHR028W-A 321 nt8.58□□□□□ -1.04
TY1A-MR1Q04215 POM34YLR018C 900 nt8.58□□□□□ -1.04
TY1A-MR1Q04215 HAT2YEL056W 1206 nt8.57□□□□□ -1.04
TY1A-MR1Q04215 OCA1YNL099C 717 nt8.57□□□□□ -1.04
TY1A-MR1Q04215 YNL165WYNL165W 1221 nt8.57□□□□□ -1.04
TY1A-MR1Q04215 YPR150WYPR150W 522 nt8.57□□□□□ -1.04
TY1A-MR1Q04215 ATG15YCR068W 1563 nt8.56□□□□□ -1.04
TY1A-MR1Q04215 HEL2YDR266C 1920 nt8.56□□□□□ -1.04
TY1A-MR1Q04215 RIM8YGL045W 1629 nt8.56□□□□□ -1.04
TY1A-MR1Q04215 YGR168CYGR168C 1131 nt8.56□□□□□ -1.04
TY1A-MR1Q04215 MIX17YMR002W 471 nt8.56□□□□□ -1.04
TY1A-MR1Q04215 OAZ1YPL052W 879 nt8.56□□□□□ -1.04
TY1A-MR1Q04215 MUP1YGR055W 1725 nt8.56□□□□□ -1.04
TY1A-MR1Q04215 SUT1YGL162W 900 nt8.55□□□□□ -1.04
TY1A-MR1Q04215 HAT1YPL001W 1125 nt8.55□□□□□ -1.04
TY1A-MR1Q04215 DBP1YPL119C 1854 nt8.54□□□□□ -1.04
TY1A-MR1Q04215 PCL6YER059W 1263 nt8.54□□□□□ -1.04
TY1A-MR1Q04215 YFL066CYFL066C 1179 nt8.54□□□□□ -1.04
TY1A-MR1Q04215 YJL211CYJL211C 444 nt8.54□□□□□ -1.04
TY1A-MR1Q04215 NMD4YLR363C 657 nt8.54□□□□□ -1.04
TY1A-MR1Q04215 HXT1YHR094C 1713 nt8.54□□□□□ -1.04
TY1A-MR1Q04215 HOL1YNR055C 1761 nt8.53□□□□□ -1.04
TY1A-MR1Q04215 RAI1YGL246C 1164 nt8.53□□□□□ -1.04
TY1A-MR1Q04215 DIF1YLR437C 402 nt8.53□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms