Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 ERJ5YFR041C 888 nt12.15□□□□□ -0.46
UBP9P39967 SPO16YHR153C 597 nt12.15□□□□□ -0.46
UBP9P39967 SRT1YMR101C 1032 nt12.15□□□□□ -0.46
UBP9P39967 VPS75YNL246W 795 nt12.15□□□□□ -0.46
UBP9P39967 SPT8YLR055C 1809 nt12.14□□□□□ -0.47
UBP9P39967 MIR1YJR077C 936 nt12.13□□□□□ -0.47
UBP9P39967 YIR016WYIR016W 798 nt12.12□□□□□ -0.47
UBP9P39967 RPF2YKR081C 1035 nt12.12□□□□□ -0.47
UBP9P39967 NCE102YPR149W 522 nt12.12□□□□□ -0.47
UBP9P39967 LEU2YCL018W 1095 nt12.12□□□□□ -0.47
UBP9P39967 RSM23YGL129C 1353 nt12.11□□□□□ -0.47
UBP9P39967 RRF1YHR038W 693 nt12.11□□□□□ -0.47
UBP9P39967 YNL067W-AYNL067W-A 147 nt12.11□□□□□ -0.47
UBP9P39967 AME1YBR211C 975 nt12.11□□□□□ -0.47
UBP9P39967 MSF1YPR047W 1410 nt12.11□□□□□ -0.47
UBP9P39967 RRS1YOR294W 612 nt12.1□□□□□ -0.47
UBP9P39967 GCN5YGR252W 1320 nt12.1□□□□□ -0.47
UBP9P39967 THI74YDR438W 1113 nt12.09□□□□□ -0.47
UBP9P39967 RPI1YIL119C 1224 nt12.09□□□□□ -0.47
UBP9P39967 Q0032Q0032 291 nt12.08□□□□□ -0.48
UBP9P39967 HAT1YPL001W 1125 nt12.08□□□□□ -0.48
UBP9P39967 URH1YDR400W 1023 nt12.06□□□□□ -0.48
UBP9P39967 YOR105WYOR105W 327 nt12.06□□□□□ -0.48
UBP9P39967 YHM2YMR241W 945 nt12.05□□□□□ -0.48
UBP9P39967 YAP7YOL028C 738 nt12.05□□□□□ -0.48
UBP9P39967 MTC7YEL033W 420 nt12.04□□□□□ -0.48
UBP9P39967 DID2YKR035W-A 615 nt12.04□□□□□ -0.48
UBP9P39967 COG5YNL051W 1212 nt12.04□□□□□ -0.48
UBP9P39967 VAC17YCL063W 1272 nt12.03□□□□□ -0.48
UBP9P39967 snR56snR56 88 nt12.02□□□□□ -0.49
UBP9P39967 YGR283CYGR283C 1026 nt12.02□□□□□ -0.49
UBP9P39967 NDL1YLR254C 570 nt12.02□□□□□ -0.49
UBP9P39967 TAP42YMR028W 1101 nt12.02□□□□□ -0.49
UBP9P39967 OCA4YCR095C 1089 nt12.01□□□□□ -0.49
UBP9P39967 ADK2YER170W 678 nt12.01□□□□□ -0.49
UBP9P39967 YGL118CYGL118C 438 nt12.01□□□□□ -0.49
UBP9P39967 TIM17YJL143W 477 nt12□□□□□ -0.49
UBP9P39967 MET8YBR213W 825 nt12□□□□□ -0.49
UBP9P39967 YLR169WYLR169W 354 nt11.99□□□□□ -0.49
UBP9P39967 PTK1YKL198C 1989 nt11.99□□□□□ -0.49
UBP9P39967 PAU7YAR020C 168 nt11.98□□□□□ -0.49
UBP9P39967 YMR074CYMR074C 438 nt11.98□□□□□ -0.49
UBP9P39967 SLI1YGR212W 1407 nt11.97□□□□□ -0.49
UBP9P39967 SHE9YDR393W 1371 nt11.97□□□□□ -0.49
UBP9P39967 YHR056W-AYHR056W-A 435 nt11.97□□□□□ -0.49
UBP9P39967 DAT1YML113W 747 nt11.97□□□□□ -0.49
UBP9P39967 SHM2YLR058C 1410 nt11.96□□□□□ -0.49
UBP9P39967 RCE1YMR274C 948 nt11.96□□□□□ -0.49
UBP9P39967 YMR181CYMR181C 465 nt11.95□□□□□ -0.5
UBP9P39967 CSL4YNL232W 879 nt11.95□□□□□ -0.5
UBP9P39967 PIC2YER053C 903 nt11.94□□□□□ -0.5
UBP9P39967 BNA2YJR078W 1362 nt11.93□□□□□ -0.5
UBP9P39967 XDJ1YLR090W 1380 nt11.93□□□□□ -0.5
UBP9P39967 POP6YGR030C 477 nt11.93□□□□□ -0.5
UBP9P39967 PTI1YGR156W 1278 nt11.93□□□□□ -0.5
UBP9P39967 YML099W-AYML099W-A 330 nt11.93□□□□□ -0.5
UBP9P39967 YKR015CYKR015C 1707 nt11.92□□□□□ -0.5
UBP9P39967 YNL319WYNL319W 441 nt11.92□□□□□ -0.5
UBP9P39967 MIC12YBR262C 321 nt11.92□□□□□ -0.5
UBP9P39967 BUD16YEL029C 939 nt11.91□□□□□ -0.5
UBP9P39967 UBA4YHR111W 1323 nt11.89□□□□□ -0.51
UBP9P39967 BNA3YJL060W 1335 nt11.89□□□□□ -0.51
UBP9P39967 SHB17YKR043C 816 nt11.89□□□□□ -0.51
UBP9P39967 RNP1YLL046C 750 nt11.89□□□□□ -0.51
UBP9P39967 RAX1YOR301W 1308 nt11.88□□□□□ -0.51
UBP9P39967 YGL034CYGL034C 366 nt11.87□□□□□ -0.51
UBP9P39967 SPC42YKL042W 1092 nt11.87□□□□□ -0.51
UBP9P39967 NDJ1YOL104C 1059 nt11.87□□□□□ -0.51
UBP9P39967 NIT1YIL164C 600 nt11.86□□□□□ -0.51
UBP9P39967 LAS1YKR063C 1509 nt11.86□□□□□ -0.51
UBP9P39967 NSA1YGL111W 1392 nt11.85□□□□□ -0.51
UBP9P39967 GDH3YAL062W 1374 nt11.85□□□□□ -0.51
UBP9P39967 YLR407WYLR407W 687 nt11.85□□□□□ -0.51
UBP9P39967 SGT2YOR007C 1041 nt11.85□□□□□ -0.51
UBP9P39967 YJL118WYJL118W 660 nt11.84□□□□□ -0.51
UBP9P39967 CMS1YLR003C 876 nt11.84□□□□□ -0.51
UBP9P39967 YDR010CYDR010C 333 nt11.83□□□□□ -0.52
UBP9P39967 YEA4YEL004W 1029 nt11.83□□□□□ -0.52
UBP9P39967 HAT2YEL056W 1206 nt11.83□□□□□ -0.52
UBP9P39967 RUF20RUF20 443 nt11.83□□□□□ -0.52
UBP9P39967 YMR244WYMR244W 1068 nt11.83□□□□□ -0.52
UBP9P39967 YNL234WYNL234W 1281 nt11.83□□□□□ -0.52
UBP9P39967 SUA5YGL169W 1281 nt11.82□□□□□ -0.52
UBP9P39967 YSR3YKR053C 1215 nt11.82□□□□□ -0.52
UBP9P39967 HHO1YPL127C 777 nt11.81□□□□□ -0.52
UBP9P39967 BRL1YHR036W 1416 nt11.8□□□□□ -0.52
UBP9P39967 AIM41YOR215C 558 nt11.8□□□□□ -0.52
UBP9P39967 YFL054CYFL054C 1941 nt11.8□□□□□ -0.52
UBP9P39967 YGR201CYGR201C 678 nt11.79□□□□□ -0.52
UBP9P39967 YFL019CYFL019C 354 nt11.78□□□□□ -0.52
UBP9P39967 ATG29YPL166W 642 nt11.78□□□□□ -0.52
UBP9P39967 XYL2YLR070C 1071 nt11.77□□□□□ -0.53
UBP9P39967 GLR1YPL091W 1452 nt11.76□□□□□ -0.53
UBP9P39967 YJR056CYJR056C 711 nt11.76□□□□□ -0.53
UBP9P39967 NAT5YOR253W 531 nt11.76□□□□□ -0.53
UBP9P39967 YDR029WYDR029W 315 nt11.75□□□□□ -0.53
UBP9P39967 YMR075C-AYMR075C-A 366 nt11.75□□□□□ -0.53
UBP9P39967 YBL081WYBL081W 1107 nt11.74□□□□□ -0.53
UBP9P39967 ESC2YDR363W 1371 nt11.74□□□□□ -0.53
UBP9P39967 YDR170W-AYDR170W-A 1323 nt11.73□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 70.3 ms