Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 PCP1YGR101W 1041 nt9.06□□□□□ -0.96
TDA11P38854 SAM1YLR180W 1149 nt9.06□□□□□ -0.96
TDA11P38854 SPP2YOR148C 558 nt9.05□□□□□ -0.96
TDA11P38854 MRS6YOR370C 1812 nt9.05□□□□□ -0.96
TDA11P38854 HXT10YFL011W 1641 nt9.05□□□□□ -0.96
TDA11P38854 DIG1YPL049C 1359 nt9.04□□□□□ -0.96
TDA11P38854 YOR072WYOR072W 315 nt9.04□□□□□ -0.96
TDA11P38854 FMS1YMR020W 1527 nt9.04□□□□□ -0.96
TDA11P38854 MDM35YKL053C-A 261 nt9.03□□□□□ -0.96
TDA11P38854 MEP3YPR138C 1470 nt9.02□□□□□ -0.96
TDA11P38854 YAR028WYAR028W 705 nt9.02□□□□□ -0.97
TDA11P38854 TOM6YOR045W 186 nt9.02□□□□□ -0.97
TDA11P38854 YKL133CYKL133C 1392 nt9.01□□□□□ -0.97
TDA11P38854 THI72YOR192C 1800 nt9.01□□□□□ -0.97
TDA11P38854 VPS62YGR141W 1404 nt9.01□□□□□ -0.97
TDA11P38854 TOA2YKL058W 369 nt9.01□□□□□ -0.97
TDA11P38854 YDL086WYDL086W 822 nt9□□□□□ -0.97
TDA11P38854 BRR1YPR057W 1026 nt9□□□□□ -0.97
TDA11P38854 RPL4BYDR012W 1089 nt8.99□□□□□ -0.97
TDA11P38854 RPL4AYBR031W 1089 nt8.99□□□□□ -0.97
TDA11P38854 YPL251WYPL251W 303 nt8.99□□□□□ -0.97
TDA11P38854 YHL019W-AYHL019W-A 594 nt8.98□□□□□ -0.97
TDA11P38854 TIF6YPR016C 738 nt8.98□□□□□ -0.97
TDA11P38854 GND2YGR256W 1479 nt8.97□□□□□ -0.97
TDA11P38854 MTG2YHR168W 1557 nt8.97□□□□□ -0.97
TDA11P38854 YPS3YLR121C 1527 nt8.96□□□□□ -0.97
TDA11P38854 TRT2tT(CGU)K 72 nt8.96□□□□□ -0.98
TDA11P38854 RPS14BYJL191W 417 nt8.96□□□□□ -0.98
TDA11P38854 YHR219WYHR219W 1875 nt8.96□□□□□ -0.98
TDA11P38854 FLR1YBR008C 1647 nt8.94□□□□□ -0.98
TDA11P38854 CWP2YKL096W-A 279 nt8.94□□□□□ -0.98
TDA11P38854 NBA1YOL070C 1506 nt8.94□□□□□ -0.98
TDA11P38854 MEX67YPL169C 1800 nt8.94□□□□□ -0.98
TDA11P38854 PHO23YNL097C 993 nt8.93□□□□□ -0.98
TDA11P38854 CLB6YGR109C 1143 nt8.92□□□□□ -0.98
TDA11P38854 YRF1-2YER190W 5046 nt8.92□□□□□ -0.98
TDA11P38854 GTB1YDR221W 2109 nt8.91□□□□□ -0.98
TDA11P38854 YLR111WYLR111W 333 nt8.91□□□□□ -0.98
TDA11P38854 AGP3YFL055W 1677 nt8.91□□□□□ -0.98
TDA11P38854 MDL2YPL270W 2322 nt8.91□□□□□ -0.98
TDA11P38854 RAD23YEL037C 1197 nt8.9□□□□□ -0.98
TDA11P38854 PEX2YJL210W 816 nt8.9□□□□□ -0.98
TDA11P38854 HIP1YGR191W 1812 nt8.89□□□□□ -0.99
TDA11P38854 UTH1YKR042W 1098 nt8.89□□□□□ -0.99
TDA11P38854 YLR437C-AYLR437C-A 228 nt8.88□□□□□ -0.99
TDA11P38854 MTO1YGL236C 2010 nt8.87□□□□□ -0.99
TDA11P38854 DLD2YDL178W 1593 nt8.86□□□□□ -0.99
TDA11P38854 SAM2YDR502C 1155 nt8.85□□□□□ -0.99
TDA11P38854 YMR103CYMR103C 363 nt8.85□□□□□ -0.99
TDA11P38854 LSR1LSR1 1175 nt8.85□□□□□ -0.99
TDA11P38854 AKR2YOR034C 2250 nt8.84□□□□□ -0.99
TDA11P38854 TSC10YBR265W 963 nt8.84□□□□□ -0.99
TDA11P38854 CAB5YDR196C 726 nt8.83□□□□□ -1
TDA11P38854 TIM44YIL022W 1296 nt8.83□□□□□ -1
TDA11P38854 HEM13YDR044W 987 nt8.82□□□□□ -1
TDA11P38854 SDH5YOL071W 489 nt8.82□□□□□ -1
TDA11P38854 RPD3YNL330C 1302 nt8.81□□□□□ -1
TDA11P38854 ALP1YNL270C 1722 nt8.81□□□□□ -1
TDA11P38854 RIB3YDR487C 627 nt8.81□□□□□ -1
TDA11P38854 YGR012WYGR012W 1182 nt8.81□□□□□ -1
TDA11P38854 MET28YIR017C 564 nt8.81□□□□□ -1
TDA11P38854 DLD3YEL071W 1491 nt8.81□□□□□ -1
TDA11P38854 YMR262WYMR262W 942 nt8.8□□□□□ -1
TDA11P38854 NRT1YOR071C 1797 nt8.8□□□□□ -1
TDA11P38854 OXA1YER154W 1209 nt8.78□□□□□ -1
TDA11P38854 RAD51YER095W 1203 nt8.77□□□□□ -1.01
TDA11P38854 YLR279WYLR279W 390 nt8.77□□□□□ -1.01
TDA11P38854 SEC61YLR378C 1443 nt8.77□□□□□ -1.01
TDA11P38854 tD(GUC)BtD(GUC)B 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)DtD(GUC)D 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)G1tD(GUC)G1 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)G2tD(GUC)G2 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)I1tD(GUC)I1 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)I2tD(GUC)I2 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)J1tD(GUC)J1 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)J2tD(GUC)J2 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)J3tD(GUC)J3 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)J4tD(GUC)J4 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)KtD(GUC)K 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)L1tD(GUC)L1 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)L2tD(GUC)L2 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)MtD(GUC)M 72 nt8.76□□□□□ -1.01
TDA11P38854 tD(GUC)OtD(GUC)O 72 nt8.76□□□□□ -1.01
TDA11P38854 MIM1YOL026C 342 nt8.76□□□□□ -1.01
TDA11P38854 DAK2YFL053W 1776 nt8.76□□□□□ -1.01
TDA11P38854 AIM1YAL046C 357 nt8.74□□□□□ -1.01
TDA11P38854 FET5YFL041W 1869 nt8.73□□□□□ -1.01
TDA11P38854 FIT3YOR383C 615 nt8.73□□□□□ -1.01
TDA11P38854 RIM2YBR192W 1134 nt8.73□□□□□ -1.01
TDA11P38854 YLR046CYLR046C 813 nt8.72□□□□□ -1.01
TDA11P38854 HBS1YKR084C 1836 nt8.72□□□□□ -1.01
TDA11P38854 ILV2YMR108W 2064 nt8.71□□□□□ -1.02
TDA11P38854 MSB4YOL112W 1479 nt8.7□□□□□ -1.02
TDA11P38854 YLR349WYLR349W 507 nt8.7□□□□□ -1.02
TDA11P38854 RPC31YNL151C 756 nt8.7□□□□□ -1.02
TDA11P38854 DPL1YDR294C 1770 nt8.7□□□□□ -1.02
TDA11P38854 SSN3YPL042C 1668 nt8.69□□□□□ -1.02
TDA11P38854 INH1YDL181W 258 nt8.69□□□□□ -1.02
TDA11P38854 UFD1YGR048W 1086 nt8.69□□□□□ -1.02
TDA11P38854 FIT1YDR534C 1587 nt8.69□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 37.3 ms