Protein–RNA interactions for Protein: P38805

RPF1, Ribosome production factor 1, yeastyeast

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPF1P38805 tD(GUC)G1tD(GUC)G1 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)G2tD(GUC)G2 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)I1tD(GUC)I1 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)I2tD(GUC)I2 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)J1tD(GUC)J1 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)J2tD(GUC)J2 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)J3tD(GUC)J3 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)J4tD(GUC)J4 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)KtD(GUC)K 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)L1tD(GUC)L1 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)L2tD(GUC)L2 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)MtD(GUC)M 72 nt7.1□□□□□ -1.27
RPF1P38805 tD(GUC)OtD(GUC)O 72 nt7.1□□□□□ -1.27
RPF1P38805 CWP2YKL096W-A 279 nt7.1□□□□□ -1.27
RPF1P38805 GID8YMR135C 1368 nt7.09□□□□□ -1.27
RPF1P38805 YNL190WYNL190W 615 nt7.09□□□□□ -1.27
RPF1P38805 LSR1LSR1 1175 nt7.09□□□□□ -1.27
RPF1P38805 MAM3YOL060C 2121 nt7.09□□□□□ -1.28
RPF1P38805 SNU66YOR308C 1764 nt7.08□□□□□ -1.28
RPF1P38805 URA6YKL024C 615 nt7.08□□□□□ -1.28
RPF1P38805 SGT2YOR007C 1041 nt7.08□□□□□ -1.28
RPF1P38805 DIG1YPL049C 1359 nt7.07□□□□□ -1.28
RPF1P38805 DIF1YLR437C 402 nt7.06□□□□□ -1.28
RPF1P38805 MRS6YOR370C 1812 nt7.05□□□□□ -1.28
RPF1P38805 YKL133CYKL133C 1392 nt7.05□□□□□ -1.28
RPF1P38805 PRO1YDR300C 1287 nt7.04□□□□□ -1.28
RPF1P38805 LAS17YOR181W 1902 nt7.03□□□□□ -1.28
RPF1P38805 NDE1YMR145C 1683 nt7.02□□□□□ -1.29
RPF1P38805 POM34YLR018C 900 nt7.01□□□□□ -1.29
RPF1P38805 YML089CYML089C 369 nt7.01□□□□□ -1.29
RPF1P38805 DUS3YLR401C 2007 nt7.01□□□□□ -1.29
RPF1P38805 YBL086CYBL086C 1401 nt7.01□□□□□ -1.29
RPF1P38805 FRT1YOR324C 1809 nt7□□□□□ -1.29
RPF1P38805 ZTA1YBR046C 1005 nt7□□□□□ -1.29
RPF1P38805 YSP3YOR003W 1437 nt7□□□□□ -1.29
RPF1P38805 POP2YNR052C 1302 nt7□□□□□ -1.29
RPF1P38805 VPS75YNL246W 795 nt6.99□□□□□ -1.29
RPF1P38805 YRF1-1YDR545W 5391 nt6.99□□□□□ -1.29
RPF1P38805 YRF1-5YLR467W 5391 nt6.99□□□□□ -1.29
RPF1P38805 YRF1-8YOR396W 5391 nt6.99□□□□□ -1.29
RPF1P38805 ATG15YCR068W 1563 nt6.99□□□□□ -1.29
RPF1P38805 UFO1YML088W 2007 nt6.98□□□□□ -1.29
RPF1P38805 SHH4YLR164W 507 nt6.98□□□□□ -1.29
RPF1P38805 LIP1YMR298W 453 nt6.98□□□□□ -1.29
RPF1P38805 PMA2YPL036W 2844 nt6.98□□□□□ -1.29
RPF1P38805 RET2YFR051C 1641 nt6.98□□□□□ -1.29
RPF1P38805 SAM2YDR502C 1155 nt6.97□□□□□ -1.29
RPF1P38805 GNP1YDR508C 1992 nt6.97□□□□□ -1.29
RPF1P38805 ACH1YBL015W 1581 nt6.96□□□□□ -1.29
RPF1P38805 YDL086WYDL086W 822 nt6.96□□□□□ -1.3
RPF1P38805 TIM44YIL022W 1296 nt6.96□□□□□ -1.3
RPF1P38805 ADE16YLR028C 1776 nt6.95□□□□□ -1.3
RPF1P38805 VPS62YGR141W 1404 nt6.95□□□□□ -1.3
RPF1P38805 LSM5YER146W 282 nt6.95□□□□□ -1.3
RPF1P38805 PET8YNL003C 855 nt6.95□□□□□ -1.3
RPF1P38805 PEX25YPL112C 1185 nt6.95□□□□□ -1.3
RPF1P38805 YHR219WYHR219W 1875 nt6.95□□□□□ -1.3
RPF1P38805 YIL177CYIL177C 5277 nt6.95□□□□□ -1.3
RPF1P38805 FET5YFL041W 1869 nt6.94□□□□□ -1.3
RPF1P38805 BEM1YBR200W 1656 nt6.94□□□□□ -1.3
RPF1P38805 SED1YDR077W 1017 nt6.94□□□□□ -1.3
RPF1P38805 YMR262WYMR262W 942 nt6.94□□□□□ -1.3
RPF1P38805 LEU9YOR108W 1815 nt6.94□□□□□ -1.3
RPF1P38805 INH1YDL181W 258 nt6.93□□□□□ -1.3
RPF1P38805 ORT1YOR130C 879 nt6.93□□□□□ -1.3
RPF1P38805 OYE3YPL171C 1203 nt6.93□□□□□ -1.3
RPF1P38805 MTG2YHR168W 1557 nt6.93□□□□□ -1.3
RPF1P38805 YNL115CYNL115C 1935 nt6.91□□□□□ -1.3
RPF1P38805 GGC1YDL198C 903 nt6.91□□□□□ -1.3
RPF1P38805 CCR4YAL021C 2514 nt6.9□□□□□ -1.3
RPF1P38805 SPP2YOR148C 558 nt6.9□□□□□ -1.3
RPF1P38805 CTF3YLR381W 2202 nt6.89□□□□□ -1.31
RPF1P38805 PAU7YAR020C 168 nt6.89□□□□□ -1.31
RPF1P38805 YAR028WYAR028W 705 nt6.89□□□□□ -1.31
RPF1P38805 SAM1YLR180W 1149 nt6.89□□□□□ -1.31
RPF1P38805 RPD3YNL330C 1302 nt6.89□□□□□ -1.31
RPF1P38805 HXT12YIL170W 1374 nt6.89□□□□□ -1.31
RPF1P38805 PFS2YNL317W 1398 nt6.88□□□□□ -1.31
RPF1P38805 YFR018CYFR018C 1092 nt6.88□□□□□ -1.31
RPF1P38805 FLR1YBR008C 1647 nt6.87□□□□□ -1.31
RPF1P38805 FMS1YMR020W 1527 nt6.87□□□□□ -1.31
RPF1P38805 snR4snR4 186 nt6.87□□□□□ -1.31
RPF1P38805 MAS1YLR163C 1389 nt6.86□□□□□ -1.31
RPF1P38805 YER190C-AYER190C-A 576 nt6.86□□□□□ -1.31
RPF1P38805 YGR296C-AYGR296C-A 576 nt6.86□□□□□ -1.31
RPF1P38805 YML133W-AYML133W-A 576 nt6.86□□□□□ -1.31
RPF1P38805 AIM34YMR003W 597 nt6.86□□□□□ -1.31
RPF1P38805 YNL339W-AYNL339W-A 576 nt6.86□□□□□ -1.31
RPF1P38805 PRE6YOL038W 765 nt6.86□□□□□ -1.31
RPF1P38805 YPL283W-AYPL283W-A 576 nt6.86□□□□□ -1.31
RPF1P38805 GND1YHR183W 1470 nt6.85□□□□□ -1.31
RPF1P38805 RIM2YBR192W 1134 nt6.85□□□□□ -1.31
RPF1P38805 KRR1YCL059C 951 nt6.84□□□□□ -1.31
RPF1P38805 TRT2tT(CGU)K 72 nt6.84□□□□□ -1.31
RPF1P38805 BRR1YPR057W 1026 nt6.84□□□□□ -1.31
RPF1P38805 RRT5YFR032C 870 nt6.83□□□□□ -1.32
RPF1P38805 TOA2YKL058W 369 nt6.83□□□□□ -1.32
RPF1P38805 TIF6YPR016C 738 nt6.83□□□□□ -1.32
RPF1P38805 TOP3YLR234W 1971 nt6.82□□□□□ -1.32
RPF1P38805 UTH1YKR042W 1098 nt6.82□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 26.4 ms