Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 PAU5YFL020C 369 nt8.12□□□□□ -1.11
CDC39P25655 OYE3YPL171C 1203 nt8.12□□□□□ -1.11
CDC39P25655 TRT2tT(CGU)K 72 nt8.12□□□□□ -1.11
CDC39P25655 YJL055WYJL055W 738 nt8.12□□□□□ -1.11
CDC39P25655 UFO1YML088W 2007 nt8.11□□□□□ -1.11
CDC39P25655 VRG4YGL225W 1014 nt8.11□□□□□ -1.11
CDC39P25655 LEU9YOR108W 1815 nt8.1□□□□□ -1.11
CDC39P25655 PET8YNL003C 855 nt8.1□□□□□ -1.11
CDC39P25655 GND2YGR256W 1479 nt8.1□□□□□ -1.11
CDC39P25655 LSB3YFR024C-A 1380 nt8.09□□□□□ -1.11
CDC39P25655 ZRT3YKL175W 1512 nt8.08□□□□□ -1.12
CDC39P25655 TIP1YBR067C 633 nt8.08□□□□□ -1.12
CDC39P25655 PRY1YJL079C 900 nt8.06□□□□□ -1.12
CDC39P25655 YPS3YLR121C 1527 nt8.06□□□□□ -1.12
CDC39P25655 PGC1YPL206C 966 nt8.06□□□□□ -1.12
CDC39P25655 OPI10YOL032W 741 nt8.05□□□□□ -1.12
CDC39P25655 YJL118WYJL118W 660 nt8.04□□□□□ -1.12
CDC39P25655 URA6YKL024C 615 nt8.04□□□□□ -1.12
CDC39P25655 RSC8YFR037C 1674 nt8.03□□□□□ -1.12
CDC39P25655 RPC82YPR190C 1965 nt8.01□□□□□ -1.13
CDC39P25655 FLR1YBR008C 1647 nt8.01□□□□□ -1.13
CDC39P25655 CSM1YCR086W 573 nt8.01□□□□□ -1.13
CDC39P25655 SNZ1YMR096W 894 nt8.01□□□□□ -1.13
CDC39P25655 YPL251WYPL251W 303 nt8□□□□□ -1.13
CDC39P25655 SSN3YPL042C 1668 nt8□□□□□ -1.13
CDC39P25655 YJL064WYJL064W 396 nt8□□□□□ -1.13
CDC39P25655 PHO23YNL097C 993 nt8□□□□□ -1.13
CDC39P25655 GAL3YDR009W 1563 nt7.99□□□□□ -1.13
CDC39P25655 NAP1YKR048C 1254 nt7.99□□□□□ -1.13
CDC39P25655 BNI5YNL166C 1347 nt7.98□□□□□ -1.13
CDC39P25655 FUB1YCR076C 753 nt7.98□□□□□ -1.13
CDC39P25655 CMP2YML057W 1815 nt7.98□□□□□ -1.13
CDC39P25655 NUC1YJL208C 990 nt7.97□□□□□ -1.13
CDC39P25655 YBR232CYBR232C 360 nt7.97□□□□□ -1.13
CDC39P25655 HEM13YDR044W 987 nt7.97□□□□□ -1.13
CDC39P25655 RDN37-1RDN37-1 5354 nt7.96□□□□□ -1.13
CDC39P25655 RDN37-2RDN37-2 5354 nt7.96□□□□□ -1.13
CDC39P25655 CDD1YLR245C 429 nt7.96□□□□□ -1.14
CDC39P25655 YMR103CYMR103C 363 nt7.96□□□□□ -1.14
CDC39P25655 SLG1YOR008C 1137 nt7.96□□□□□ -1.14
CDC39P25655 BRR1YPR057W 1026 nt7.94□□□□□ -1.14
CDC39P25655 SEC61YLR378C 1443 nt7.94□□□□□ -1.14
CDC39P25655 SPT20YOL148C 1815 nt7.94□□□□□ -1.14
CDC39P25655 MHF1YOL086W-A 273 nt7.94□□□□□ -1.14
CDC39P25655 MSC1YML128C 1542 nt7.94□□□□□ -1.14
CDC39P25655 THI72YOR192C 1800 nt7.94□□□□□ -1.14
CDC39P25655 STP3YLR375W 1032 nt7.93□□□□□ -1.14
CDC39P25655 PAU19YMR325W 375 nt7.93□□□□□ -1.14
CDC39P25655 FMS1YMR020W 1527 nt7.93□□□□□ -1.14
CDC39P25655 SAM2YDR502C 1155 nt7.91□□□□□ -1.14
CDC39P25655 GSF2YML048W 1212 nt7.9□□□□□ -1.14
CDC39P25655 CCT2YIL142W 1584 nt7.9□□□□□ -1.15
CDC39P25655 POP2YNR052C 1302 nt7.89□□□□□ -1.15
CDC39P25655 OXA1YER154W 1209 nt7.88□□□□□ -1.15
CDC39P25655 APS2YJR058C 444 nt7.88□□□□□ -1.15
CDC39P25655 CWC15YDR163W 528 nt7.87□□□□□ -1.15
CDC39P25655 YPR126CYPR126C 309 nt7.87□□□□□ -1.15
CDC39P25655 DLD2YDL178W 1593 nt7.86□□□□□ -1.15
CDC39P25655 SAM3YPL274W 1764 nt7.84□□□□□ -1.15
CDC39P25655 ILV3YJR016C 1758 nt7.83□□□□□ -1.16
CDC39P25655 TAF13YML098W 504 nt7.83□□□□□ -1.16
CDC39P25655 YOR325WYOR325W 474 nt7.83□□□□□ -1.16
CDC39P25655 ERG6YML008C 1152 nt7.82□□□□□ -1.16
CDC39P25655 INA1YLR413W 2028 nt7.82□□□□□ -1.16
CDC39P25655 RIB7YBR153W 735 nt7.81□□□□□ -1.16
CDC39P25655 TUB4YLR212C 1422 nt7.81□□□□□ -1.16
CDC39P25655 LSB6YJL100W 1824 nt7.81□□□□□ -1.16
CDC39P25655 COQ8YGL119W 1506 nt7.8□□□□□ -1.16
CDC39P25655 ACH1YBL015W 1581 nt7.8□□□□□ -1.16
CDC39P25655 YER152W-AYER152W-A 567 nt7.79□□□□□ -1.16
CDC39P25655 OYE2YHR179W 1203 nt7.79□□□□□ -1.16
CDC39P25655 YJR114WYJR114W 393 nt7.79□□□□□ -1.16
CDC39P25655 HOL1YNR055C 1761 nt7.79□□□□□ -1.16
CDC39P25655 CTI6YPL181W 1521 nt7.79□□□□□ -1.16
CDC39P25655 TAT2YOL020W 1779 nt7.78□□□□□ -1.16
CDC39P25655 TIM44YIL022W 1296 nt7.78□□□□□ -1.16
CDC39P25655 RAS2YNL098C 969 nt7.78□□□□□ -1.16
CDC39P25655 YCR025CYCR025C 411 nt7.76□□□□□ -1.17
CDC39P25655 YER188WYER188W 720 nt7.76□□□□□ -1.17
CDC39P25655 SPP2YOR148C 558 nt7.75□□□□□ -1.17
CDC39P25655 TPS1YBR126C 1488 nt7.75□□□□□ -1.17
CDC39P25655 HEL2YDR266C 1920 nt7.74□□□□□ -1.17
CDC39P25655 ZAP1YJL056C 2643 nt7.73□□□□□ -1.17
CDC39P25655 PAR32YDL173W 888 nt7.73□□□□□ -1.17
CDC39P25655 VMA11YPL234C 495 nt7.73□□□□□ -1.17
CDC39P25655 MUP1YGR055W 1725 nt7.73□□□□□ -1.17
CDC39P25655 NAS2YIL007C 663 nt7.72□□□□□ -1.17
CDC39P25655 NIF3YGL221C 867 nt7.71□□□□□ -1.18
CDC39P25655 ARO8YGL202W 1503 nt7.71□□□□□ -1.18
CDC39P25655 RPT5YOR117W 1305 nt7.7□□□□□ -1.18
CDC39P25655 AIM1YAL046C 357 nt7.7□□□□□ -1.18
CDC39P25655 RIB1YBL033C 1038 nt7.7□□□□□ -1.18
CDC39P25655 BET2YPR176C 978 nt7.7□□□□□ -1.18
CDC39P25655 DDI1YER143W 1287 nt7.69□□□□□ -1.18
CDC39P25655 YFR036W-AYFR036W-A 651 nt7.69□□□□□ -1.18
CDC39P25655 DAK2YFL053W 1776 nt7.68□□□□□ -1.18
CDC39P25655 YKL133CYKL133C 1392 nt7.68□□□□□ -1.18
CDC39P25655 ERG13YML126C 1476 nt7.68□□□□□ -1.18
CDC39P25655 SUV3YPL029W 2214 nt7.67□□□□□ -1.18
CDC39P25655 POT1YIL160C 1254 nt7.67□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 21.6 ms