Protein–RNA interactions for Protein: P05455

SSB, Lupus La protein, humanhuman

Known RBP eCLIP

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP05455 EIF4A1-233ENST00000584784 818 ntTSL 510.73□□□□□ -0.699e-56■■■□□ 14.6
SSBP05455 EIF4A1-209ENST00000578495 916 ntTSL 510.66□□□□□ -0.79e-56■■■□□ 14.6
SSBP05455 EIF4A1-237ENST00000585024 577 ntTSL 49.62□□□□□ -0.879e-56■■■□□ 14.6
SSBP05455 EIF4A1-202ENST00000396527 1169 ntTSL 28.58□□□□□ -1.049e-56■■■□□ 14.6
SSBP05455 EIF4A1-211ENST00000578754 547 ntTSL 46.02□□□□□ -1.459e-56■■■□□ 14.6
SSBP05455 EIF4A1-204ENST00000577731 574 ntTSL 23.72□□□□□ -1.819e-56■■■□□ 14.6
SSBP05455 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC13.73□□□□□ -0.211e-54■■□□□ 14.5
SSBP05455 SNORD118-201ENST00000363593 134 ntBASIC0.78□□□□□ -2.281e-54■■□□□ 14.5
SSBP05455 SNORD1A-201ENST00000364968 72 ntBASIC2.15□□□□□ -2.072e-7■■□□□ 14.5
SSBP05455 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.14□□□□□ -1.431e-26■■□□□ 14.5
SSBP05455 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.451e-26■■□□□ 14.5
SSBP05455 CKAP5-212ENST00000533413 3084 ntTSL 1 (best)5.83□□□□□ -1.481e-26■■□□□ 14.5
SSBP05455 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.48□□□□□ -1.691e-26■■□□□ 14.5
SSBP05455 SNORD67-201ENST00000390833 111 ntBASIC3.49□□□□□ -1.851e-26■■□□□ 14.5
SSBP05455 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.459e-8■■□□□ 14.2
SSBP05455 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.29■■■□□ 2.449e-8■■□□□ 14.2
SSBP05455 FTCD-212ENST00000498355 1936 ntTSL 229.83■■■□□ 2.379e-8■■□□□ 14.2
SSBP05455 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.77■■■□□ 2.369e-8■■□□□ 14.2
SSBP05455 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.159e-8■■□□□ 14.2
SSBP05455 FTCD-210ENST00000488577 447 ntTSL 321.52■■□□□ 1.049e-8■■□□□ 14.2
SSBP05455 FTCD-211ENST00000494498 840 ntTSL 321.52■■□□□ 1.049e-8■■□□□ 14.2
SSBP05455 FTCD-206ENST00000460011 1260 ntTSL 1 (best)21.18■□□□□ 0.989e-8■■□□□ 14.2
SSBP05455 AC006064.5-201ENST00000541782 248 ntBASIC4.77□□□□□ -1.654e-9■■□□□ 13.6
SSBP05455 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.044e-9■■□□□ 13.6
SSBP05455 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC15.17■□□□□ 0.024e-9■■□□□ 13.6
SSBP05455 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC14.66□□□□□ -0.064e-9■■□□□ 13.6
SSBP05455 PPP1R8-204ENST00000431586 1029 ntTSL 314.17□□□□□ -0.144e-9■■□□□ 13.6
SSBP05455 SCARNA1-201ENST00000517138 166 ntBASIC8.52□□□□□ -1.054e-9■■□□□ 13.6
SSBP05455 AP1G1-215ENST00000568327 1724 ntTSL 520.84■□□□□ 0.931e-12■■□□□ 13.4
SSBP05455 AP1G1-208ENST00000565009 2494 ntTSL 515.26■□□□□ 0.031e-12■■□□□ 13.4
SSBP05455 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.111e-12■■□□□ 13.4
SSBP05455 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.621e-12■■□□□ 13.4
SSBP05455 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.891e-12■■□□□ 13.4
SSBP05455 AP1G1-211ENST00000565642 2794 ntTSL 57.04□□□□□ -1.281e-12■■□□□ 13.4
SSBP05455 AP1G1-213ENST00000566179 562 ntTSL 54.54□□□□□ -1.681e-12■■□□□ 13.4
SSBP05455 SNORD71-201ENST00000411292 86 ntBASIC0.78□□□□□ -2.281e-12■■□□□ 13.4
SSBP05455 SNHG16-208ENST00000591956 556 ntTSL 212.54□□□□□ -0.41e-7■■□□□ 13.3
SSBP05455 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC11.45□□□□□ -0.581e-7■■□□□ 13.3
SSBP05455 SNHG16-204ENST00000586942 568 ntTSL 4 BASIC11.31□□□□□ -0.61e-7■■□□□ 13.3
SSBP05455 SNHG16-207ENST00000590435 1947 ntTSL 5 BASIC10.8□□□□□ -0.681e-7■■□□□ 13.3
SSBP05455 SNHG16-202ENST00000493536 2424 ntTSL 1 (best)9.86□□□□□ -0.831e-7■■□□□ 13.3
SSBP05455 SNHG16-206ENST00000587838 884 ntTSL 36.13□□□□□ -1.431e-7■■□□□ 13.3
SSBP05455 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.337e-7■■□□□ 13.2
SSBP05455 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.51■■□□□ 1.997e-7■■□□□ 13.2
SSBP05455 PPIL2-207ENST00000462188 1735 ntTSL 218.41■□□□□ 0.547e-7■■□□□ 13.2
SSBP05455 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.09■□□□□ 0.337e-7■■□□□ 13.2
SSBP05455 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)16.85■□□□□ 0.297e-7■■□□□ 13.2
SSBP05455 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.167e-7■■□□□ 13.2
SSBP05455 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC14.14□□□□□ -0.157e-7■■□□□ 13.2
SSBP05455 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.177e-7■■□□□ 13.2
SSBP05455 PPIL2-204ENST00000417788 4213 ntTSL 211.45□□□□□ -0.587e-7■■□□□ 13.2
SSBP05455 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.657e-7■■□□□ 13.2
SSBP05455 AL049796.1-201ENST00000565336 1766 ntBASIC23.29■■□□□ 1.322e-8■■□□□ 13.2
SSBP05455 IGFBP3-207ENST00000460209 583 ntTSL 216.38■□□□□ 0.211e-7■■□□□ 13.1
SSBP05455 IGFBP3-204ENST00000417621 810 ntTSL 215.64■□□□□ 0.091e-7■■□□□ 13.1
SSBP05455 IGFBP3-205ENST00000428530 894 ntTSL 513.04□□□□□ -0.321e-7■■□□□ 13.1
SSBP05455 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.76■■□□□ 1.236e-8■■□□□ 13
SSBP05455 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.913e-7■■□□□ 13
SSBP05455 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.92■□□□□ 0.463e-7■■□□□ 13
SSBP05455 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.992e-6■■□□□ 12.9
SSBP05455 OAZ1-210ENST00000593012 1357 ntTSL 220.42■□□□□ 0.862e-6■■□□□ 12.9
SSBP05455 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.772e-6■■□□□ 12.9
SSBP05455 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.622e-6■■□□□ 12.9
SSBP05455 OAZ1-201ENST00000581150 1131 ntTSL 518.66■□□□□ 0.582e-6■■□□□ 12.9
SSBP05455 OAZ1-209ENST00000592787 857 ntTSL 218.03■□□□□ 0.482e-6■■□□□ 12.9
SSBP05455 OAZ1-207ENST00000590943 1012 ntTSL 217.9■□□□□ 0.462e-6■■□□□ 12.9
SSBP05455 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.132e-6■■□□□ 12.9
SSBP05455 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -12e-6■■□□□ 12.9
SSBP05455 NOP58-203ENST00000433543 714 ntTSL 37.47□□□□□ -1.212e-6■■□□□ 12.9
SSBP05455 SNORD11B-201ENST00000607707 90 ntBASIC3.51□□□□□ -1.852e-6■■□□□ 12.9
SSBP05455 SNORD111-201ENST00000408139 94 ntBASIC1.63□□□□□ -2.152e-6■■□□□ 12.9
SSBP05455 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.58■■□□□ 1.691e-6■■□□□ 12.8
SSBP05455 SNHG12-201ENST00000461448 1629 ntTSL 1 (best)21.78■■□□□ 1.081e-6■■□□□ 12.8
SSBP05455 SNHG12-208ENST00000481220 751 ntTSL 320.02■□□□□ 0.81e-6■■□□□ 12.8
SSBP05455 SNHG12-206ENST00000474814 1903 ntTSL 219.75■□□□□ 0.751e-6■■□□□ 12.8
SSBP05455 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.57■□□□□ 0.241e-6■■□□□ 12.8
SSBP05455 SNHG12-209ENST00000481368 1588 ntTSL 1 (best)15.89■□□□□ 0.131e-6■■□□□ 12.8
SSBP05455 SNHG12-205ENST00000470977 1098 ntTSL 1 (best)14.72□□□□□ -0.051e-6■■□□□ 12.8
SSBP05455 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC10.6□□□□□ -0.711e-6■■□□□ 12.8
SSBP05455 SNHG12-204ENST00000464612 719 ntTSL 1 (best)9.98□□□□□ -0.811e-6■■□□□ 12.8
SSBP05455 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.69□□□□□ -1.181e-6■■□□□ 12.8
SSBP05455 SNORD99-201ENST00000408612 74 ntBASIC1.23□□□□□ -2.211e-6■■□□□ 12.8
SSBP05455 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.8■■□□□ 1.082e-7■■□□□ 12.8
SSBP05455 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.81e-6■■□□□ 12.4
SSBP05455 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.8■□□□□ 0.61e-6■■□□□ 12.4
SSBP05455 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.771e-6■■□□□ 12.3
SSBP05455 IGFBP3-206ENST00000448817 571 ntTSL 413.93□□□□□ -0.182e-6■■□□□ 12.2
SSBP05455 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC14.13□□□□□ -0.152e-9■■□□□ 12.1
SSBP05455 AP001107.9-201ENST00000581155 286 ntTSL 311.93□□□□□ -0.52e-9■■□□□ 12.1
SSBP05455 SNORD1B-201ENST00000363091 84 ntBASIC-0.94□□□□□ -2.565e-8■■□□□ 12.1
SSBP05455 AC051619.8-201ENST00000563103 308 ntBASIC12.45□□□□□ -0.424e-6■■□□□ 12
SSBP05455 RBMX-210ENST00000565907 563 ntTSL 216.06■□□□□ 0.164e-19■■□□□ 12
SSBP05455 RBMX-204ENST00000464781 1852 ntTSL 215.41■□□□□ 0.064e-19■■□□□ 12
SSBP05455 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC14.43□□□□□ -0.14e-19■■□□□ 12
SSBP05455 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.234e-19■■□□□ 12
SSBP05455 RBMX-211ENST00000567262 477 ntTSL 513.53□□□□□ -0.244e-19■■□□□ 12
SSBP05455 RBMX-208ENST00000563370 577 ntTSL 313.53□□□□□ -0.244e-19■■□□□ 12
SSBP05455 RBMX-212ENST00000568578 4887 ntTSL 1 (best)10.88□□□□□ -0.674e-19■■□□□ 12
SSBP05455 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC10.43□□□□□ -0.744e-19■■□□□ 12
SSBP05455 RBMX-202ENST00000419968 940 ntTSL 510.26□□□□□ -0.774e-19■■□□□ 12
Retrieved 100 of 672 protein–RNA pairs in 24.5 ms