RNA–Protein interactions for RNA: ENST00000236412.11

PPP1R8-201, Transcript of protein phosphatase 1 regulatory subunit 8, humanhuman

TSL 1 (best) BASIC

Gene PPP1R8, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R8-201ENST00000236412 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
PPP1R8-201ENST00000236412 CCDC180Q9P1Z9 1646 aa25.93■■□□□ 1.74
PPP1R8-201ENST00000236412 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
PPP1R8-201ENST00000236412 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
PPP1R8-201ENST00000236412 MYO15BQ96JP2 1530 aa24.56■■□□□ 1.52
PPP1R8-201ENST00000236412 NACADO15069 1562 aa24.13■■□□□ 1.45
PPP1R8-201ENST00000236412 DCAF8L2P0C7V8 631 aa24■■□□□ 1.43
PPP1R8-201ENST00000236412 ABCC9O60706 1549 aa23.92■■□□□ 1.42
PPP1R8-201ENST00000236412 SHROOM4Q9ULL8 1493 aa23.86■■□□□ 1.41
PPP1R8-201ENST00000236412 RB1CC1Q8TDY2 1594 aa23.78■■□□□ 1.4
PPP1R8-201ENST00000236412 SCRIBQ14160 1630 aa23.49■■□□□ 1.35
PPP1R8-201ENST00000236412 SUPT5HO00267 1087 aaKnown RBP23.16■■□□□ 1.3
PPP1R8-201ENST00000236412 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.29
PPP1R8-201ENST00000236412 UNC13AQ9UPW8 1703 aa23.04■■□□□ 1.28
PPP1R8-201ENST00000236412 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
PPP1R8-201ENST00000236412 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
PPP1R8-201ENST00000236412 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
PPP1R8-201ENST00000236412 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
PPP1R8-201ENST00000236412 SMARCA4P51532 1647 aa22.74■■□□□ 1.23
PPP1R8-201ENST00000236412 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
PPP1R8-201ENST00000236412 WIZO95785 1651 aa22.56■■□□□ 1.2
PPP1R8-201ENST00000236412 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
PPP1R8-201ENST00000236412 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.2
PPP1R8-201ENST00000236412 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
PPP1R8-201ENST00000236412 SMARCA2P51531 1590 aa22.44■■□□□ 1.18
PPP1R8-201ENST00000236412 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
PPP1R8-201ENST00000236412 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
PPP1R8-201ENST00000236412 CCDC88BA6NC98 1476 aa22.24■■□□□ 1.15
PPP1R8-201ENST00000236412 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
PPP1R8-201ENST00000236412 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
PPP1R8-201ENST00000236412 BAZ1BQ9UIG0 1483 aaKnown RBP22.19■■□□□ 1.14
PPP1R8-201ENST00000236412 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
PPP1R8-201ENST00000236412 CC2D2AQ9P2K1 1620 aa21.79■■□□□ 1.08
PPP1R8-201ENST00000236412 EEA1Q15075 1411 aa21.76■■□□□ 1.07
PPP1R8-201ENST00000236412 CFTRP13569 1480 aa21.76■■□□□ 1.07
PPP1R8-201ENST00000236412 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
PPP1R8-201ENST00000236412 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
PPP1R8-201ENST00000236412 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
PPP1R8-201ENST00000236412 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
PPP1R8-201ENST00000236412 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
PPP1R8-201ENST00000236412 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
PPP1R8-201ENST00000236412 SYNJ1O43426 1573 aa21.49■■□□□ 1.03
PPP1R8-201ENST00000236412 LOC105371045A0A1W2PR82 267 aa21.43■■□□□ 1.02
PPP1R8-201ENST00000236412 LAMC3Q9Y6N6 1575 aa21.42■■□□□ 1.02
PPP1R8-201ENST00000236412 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
PPP1R8-201ENST00000236412 CUX1P39880 1505 aa21.35■■□□□ 1.01
PPP1R8-201ENST00000236412 SOGA1O94964 1423 aa21.35■■□□□ 1.01
PPP1R8-201ENST00000236412 TNIKQ9UKE5 1360 aa21.31■■□□□ 1
PPP1R8-201ENST00000236412 KIF21BO75037 1637 aa21.3■■□□□ 1
PPP1R8-201ENST00000236412 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
PPP1R8-201ENST00000236412 CEP164Q9UPV0 1460 aa21.28■■□□□ 1
PPP1R8-201ENST00000236412 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
PPP1R8-201ENST00000236412 GOLGA3Q08378 1498 aa21.26■□□□□ 0.99
PPP1R8-201ENST00000236412 PDS5BQ9NTI5 1447 aa21.24■□□□□ 0.99
PPP1R8-201ENST00000236412 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
PPP1R8-201ENST00000236412 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
PPP1R8-201ENST00000236412 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
PPP1R8-201ENST00000236412 ERICH3Q5RHP9 1530 aa21.18■□□□□ 0.98
PPP1R8-201ENST00000236412 PRXQ9BXM0 1461 aa21.14■□□□□ 0.97
PPP1R8-201ENST00000236412 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
PPP1R8-201ENST00000236412 FGD5Q6ZNL6 1462 aa21.07■□□□□ 0.96
PPP1R8-201ENST00000236412 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
PPP1R8-201ENST00000236412 NESP48681 1621 aa21.05■□□□□ 0.96
PPP1R8-201ENST00000236412 CEP162Q5TB80 1403 aa21.03■□□□□ 0.96
PPP1R8-201ENST00000236412 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
PPP1R8-201ENST00000236412 IGF1RP08069 1367 aa20.97■□□□□ 0.95
PPP1R8-201ENST00000236412 URB2Q14146 1524 aaKnown RBP20.96■□□□□ 0.95
PPP1R8-201ENST00000236412 CUX2O14529 1486 aa20.96■□□□□ 0.95
PPP1R8-201ENST00000236412 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
PPP1R8-201ENST00000236412 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
PPP1R8-201ENST00000236412 TRIM26Q12899 539 aaPredicted RBP20.94■□□□□ 0.94
PPP1R8-201ENST00000236412 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
PPP1R8-201ENST00000236412 WDR97A6NE52 1622 aa20.89■□□□□ 0.93
PPP1R8-201ENST00000236412 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
PPP1R8-201ENST00000236412 CLIP1P30622 1438 aa20.85■□□□□ 0.93
PPP1R8-201ENST00000236412 KIF21AQ7Z4S6 1674 aa20.85■□□□□ 0.93
PPP1R8-201ENST00000236412 CARMIL1Q5VZK9 1371 aa20.85■□□□□ 0.93
PPP1R8-201ENST00000236412 CUL7Q14999 1698 aa20.84■□□□□ 0.93
PPP1R8-201ENST00000236412 WDR62O43379 1518 aa20.81■□□□□ 0.92
PPP1R8-201ENST00000236412 ABCA5Q8WWZ7 1642 aa20.79■□□□□ 0.92
PPP1R8-201ENST00000236412 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
PPP1R8-201ENST00000236412 VPS8Q8N3P4 1428 aa20.77■□□□□ 0.92
PPP1R8-201ENST00000236412 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
PPP1R8-201ENST00000236412 IFT140Q96RY7 1462 aa20.74■□□□□ 0.91
PPP1R8-201ENST00000236412 GAPVD1Q14C86 1478 aa20.72■□□□□ 0.91
PPP1R8-201ENST00000236412 EHMT2Q96KQ7 1210 aa20.68■□□□□ 0.9
PPP1R8-201ENST00000236412 PCGF6Q9BYE7 350 aa20.67■□□□□ 0.9
PPP1R8-201ENST00000236412 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
PPP1R8-201ENST00000236412 ARAP1Q96P48 1450 aa20.6■□□□□ 0.89
PPP1R8-201ENST00000236412 MAP3K1Q13233 1512 aa20.6■□□□□ 0.89
PPP1R8-201ENST00000236412 THOC2Q8NI27 1593 aaKnown RBP20.59■□□□□ 0.89
PPP1R8-201ENST00000236412 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
PPP1R8-201ENST00000236412 GRIN2BQ13224 1484 aa20.59■□□□□ 0.89
PPP1R8-201ENST00000236412 ERCC6Q03468 1493 aa20.58■□□□□ 0.88
PPP1R8-201ENST00000236412 ARHGAP35Q9NRY4 1499 aa20.58■□□□□ 0.88
PPP1R8-201ENST00000236412 TDRD9Q8NDG6 1382 aaKnown RBP20.56■□□□□ 0.88
PPP1R8-201ENST00000236412 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.872e-8■■■■□ 20.8
PPP1R8-201ENST00000236412 APLP2Q06481 763 aa20.5■□□□□ 0.87
PPP1R8-201ENST00000236412 CTTNBP2Q8WZ74 1663 aa20.5■□□□□ 0.87
PPP1R8-201ENST00000236412 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms