Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 AC008894.3-201ENST00000624324 3103 ntBASIC14.72□□□□□ -0.05
VPS25Q9BRG1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
VPS25Q9BRG1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 PCDHAC2-203ENST00000615316 3011 ntBASIC14.71□□□□□ -0.05
VPS25Q9BRG1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS25Q9BRG1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS25Q9BRG1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS25Q9BRG1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 ESRRAP2-201ENST00000418437 1549 ntBASIC14.69□□□□□ -0.06
VPS25Q9BRG1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.69□□□□□ -0.06
VPS25Q9BRG1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms