RNA–Protein interactions for RNA: ENST00000268763.10

KSR1-201, Transcript of kinase suppressor of ras 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KSR1, Length 2,806 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KSR1-201ENST00000268763 NISCHQ9Y2I1 1504 aa31.83■■■□□ 2.69
KSR1-201ENST00000268763 HRCP23327 699 aa29.27■■■□□ 2.28
KSR1-201ENST00000268763 PELP1Q8IZL8 1130 aaKnown RBP28.65■■■□□ 2.18
KSR1-201ENST00000268763 PPARGC1BQ86YN6 1023 aaKnown RBP28.59■■■□□ 2.17
KSR1-201ENST00000268763 PCGF6Q9BYE7 350 aa28.52■■■□□ 2.16
KSR1-201ENST00000268763 SUPT5HO00267 1087 aaKnown RBP28.39■■■□□ 2.14
KSR1-201ENST00000268763 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
KSR1-201ENST00000268763 MYO15BQ96JP2 1530 aa28.25■■■□□ 2.11
KSR1-201ENST00000268763 CHIC1Q5VXU3 224 aa28.05■■■□□ 2.08
KSR1-201ENST00000268763 SCAF1Q9H7N4 1312 aaKnown RBP27.8■■■□□ 2.04
KSR1-201ENST00000268763 DCAF1Q9Y4B6 1507 aa27.79■■■□□ 2.04
KSR1-201ENST00000268763 MYT1Q01538 1121 aa27.63■■■□□ 2.01
KSR1-201ENST00000268763 TRIM26Q12899 539 aaPredicted RBP27.59■■■□□ 2.01
KSR1-201ENST00000268763 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
KSR1-201ENST00000268763 ZEB1P37275 1124 aaPredicted RBP27.48■■□□□ 1.99
KSR1-201ENST00000268763 LOC105371045A0A1W2PR82 267 aa27.4■■□□□ 1.98
KSR1-201ENST00000268763 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
KSR1-201ENST00000268763 ACIN1Q9UKV3 1341 aaKnown RBP27.07■■□□□ 1.92
KSR1-201ENST00000268763 NEUROD1Q13562 356 aa26.96■■□□□ 1.91
KSR1-201ENST00000268763 GTF3C3Q9Y5Q9 886 aa26.85■■□□□ 1.89
KSR1-201ENST00000268763 CENPBP07199 599 aaPredicted RBP26.73■■□□□ 1.87
KSR1-201ENST00000268763 DIEXFQ68CQ4 756 aaKnown RBP26.48■■□□□ 1.83
KSR1-201ENST00000268763 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
KSR1-201ENST00000268763 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.34■■□□□ 1.81
KSR1-201ENST00000268763 CCER1Q8TC90 406 aaPredicted RBP26.34■■□□□ 1.81
KSR1-201ENST00000268763 TRIM41Q8WV44 630 aa26.24■■□□□ 1.79
KSR1-201ENST00000268763 FAM9AQ8IZU1 332 aaPredicted RBP26.24■■□□□ 1.79
KSR1-201ENST00000268763 EHMT2Q96KQ7 1210 aa26.11■■□□□ 1.77
KSR1-201ENST00000268763 YTHDC1Q96MU7 727 aaKnown RBP26.05■■□□□ 1.76
KSR1-201ENST00000268763 TTBK1Q5TCY1 1321 aaPredicted RBP25.97■■□□□ 1.75
KSR1-201ENST00000268763 ZNF316A6NFI3 1004 aaPredicted RBP25.92■■□□□ 1.74
KSR1-201ENST00000268763 ABCC9O60706 1549 aa25.83■■□□□ 1.72
KSR1-201ENST00000268763 MIER1Q8N108 512 aa25.76■■□□□ 1.71
KSR1-201ENST00000268763 BCL11AQ9H165 835 aa25.75■■□□□ 1.71
KSR1-201ENST00000268763 RSF1Q96T23 1441 aaPredicted RBP25.72■■□□□ 1.71
KSR1-201ENST00000268763 RB1CC1Q8TDY2 1594 aa25.66■■□□□ 1.7
KSR1-201ENST00000268763 ANP32EQ9BTT0 268 aa25.66■■□□□ 1.7
KSR1-201ENST00000268763 CLSPNQ9HAW4 1339 aa25.51■■□□□ 1.67
KSR1-201ENST00000268763 SUPT16HQ9Y5B9 1047 aaKnown RBP25.5■■□□□ 1.67
KSR1-201ENST00000268763 TSHZ2Q9NRE2 1034 aa25.46■■□□□ 1.67
KSR1-201ENST00000268763 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
KSR1-201ENST00000268763 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
KSR1-201ENST00000268763 CEP162Q5TB80 1403 aa25.21■■□□□ 1.63
KSR1-201ENST00000268763 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
KSR1-201ENST00000268763 HNRNPUL2Q1KMD3 747 aaKnown RBP25.1■■□□□ 1.61
KSR1-201ENST00000268763 TNIKQ9UKE5 1360 aa25.03■■□□□ 1.6
KSR1-201ENST00000268763 BCANQ96GW7 911 aa24.9■■□□□ 1.58
KSR1-201ENST00000268763 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
KSR1-201ENST00000268763 CECR2Q9BXF3 1484 aa24.88■■□□□ 1.57
KSR1-201ENST00000268763 UBTFP17480 764 aaKnown RBP24.88■■□□□ 1.57
KSR1-201ENST00000268763 EIF4G1Q04637 1599 aaKnown RBP24.87■■□□□ 1.57
KSR1-201ENST00000268763 RBM19Q9Y4C8 960 aaKnown RBP24.85■■□□□ 1.57
KSR1-201ENST00000268763 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
KSR1-201ENST00000268763 WIZO95785 1651 aa24.84■■□□□ 1.57
KSR1-201ENST00000268763 ABCC8Q09428 1581 aa24.81■■□□□ 1.56
KSR1-201ENST00000268763 PRKCSHP14314 528 aaPredicted RBP24.8■■□□□ 1.56
KSR1-201ENST00000268763 FKBP8Q14318 412 aa24.79■■□□□ 1.56
KSR1-201ENST00000268763 SOGA1O94964 1423 aa24.78■■□□□ 1.56
KSR1-201ENST00000268763 EEA1Q15075 1411 aa24.69■■□□□ 1.54
KSR1-201ENST00000268763 KCNH8Q96L42 1107 aa24.67■■□□□ 1.54
KSR1-201ENST00000268763 GOLGA3Q08378 1498 aa24.67■■□□□ 1.54
KSR1-201ENST00000268763 BAZ1AQ9NRL2 1556 aaPredicted RBP24.67■■□□□ 1.54
KSR1-201ENST00000268763 DHX57Q6P158 1386 aaKnown RBP24.62■■□□□ 1.53
KSR1-201ENST00000268763 MSH5O43196 834 aa24.62■■□□□ 1.53
KSR1-201ENST00000268763 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
KSR1-201ENST00000268763 NEFLP07196 543 aa24.61■■□□□ 1.53
KSR1-201ENST00000268763 APLP2Q06481 763 aa24.58■■□□□ 1.53
KSR1-201ENST00000268763 ITGAEP38570 1179 aa24.53■■□□□ 1.52
KSR1-201ENST00000268763 VPS8Q8N3P4 1428 aa24.49■■□□□ 1.51
KSR1-201ENST00000268763 ERICH6Q7L0X2 663 aa24.49■■□□□ 1.51
KSR1-201ENST00000268763 CLIP1P30622 1438 aa24.49■■□□□ 1.51
KSR1-201ENST00000268763 NACADO15069 1562 aa24.45■■□□□ 1.5
KSR1-201ENST00000268763 FANCIQ9NVI1 1328 aa24.44■■□□□ 1.5
KSR1-201ENST00000268763 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
KSR1-201ENST00000268763 MYT1LQ9UL68 1186 aa24.38■■□□□ 1.49
KSR1-201ENST00000268763 TOP2AP11388 1531 aaKnown RBP24.34■■□□□ 1.49
KSR1-201ENST00000268763 KIF21BO75037 1637 aa24.3■■□□□ 1.48
KSR1-201ENST00000268763 DEKP35659 375 aaKnown RBP24.3■■□□□ 1.48
KSR1-201ENST00000268763 DDX10Q13206 875 aaKnown RBP24.3■■□□□ 1.48
KSR1-201ENST00000268763 TRIM52Q96A61 297 aa24.29■■□□□ 1.48
KSR1-201ENST00000268763 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
KSR1-201ENST00000268763 CDK11AQ9UQ88 783 aaPredicted RBP24.27■■□□□ 1.48
KSR1-201ENST00000268763 RANGAP1P46060 587 aaPredicted RBP24.22■■□□□ 1.47
KSR1-201ENST00000268763 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
KSR1-201ENST00000268763 CCER2I3L3R5 266 aa24.17■■□□□ 1.46
KSR1-201ENST00000268763 PPP1R15AO75807 674 aaPredicted RBP24.13■■□□□ 1.45
KSR1-201ENST00000268763 ANO8Q9HCE9 1232 aaPredicted RBP24.12■■□□□ 1.45
KSR1-201ENST00000268763 CUX2O14529 1486 aa24.11■■□□□ 1.45
KSR1-201ENST00000268763 ANP32CO43423 234 aa24.1■■□□□ 1.45
KSR1-201ENST00000268763 RAPGEF2Q9Y4G8 1499 aa24.09■■□□□ 1.45
KSR1-201ENST00000268763 RRBP1Q9P2E9 1410 aaKnown RBP24.08■■□□□ 1.44
KSR1-201ENST00000268763 KANK4Q5T7N3 995 aaPredicted RBP24.07■■□□□ 1.44
KSR1-201ENST00000268763 IRX6P78412 446 aaPredicted RBP24.04■■□□□ 1.44
KSR1-201ENST00000268763 WDR97A6NE52 1622 aa24.01■■□□□ 1.43
KSR1-201ENST00000268763 MAPKBP1O60336 1514 aa24.01■■□□□ 1.43
KSR1-201ENST00000268763 SMARCA4P51532 1647 aa23.99■■□□□ 1.43
KSR1-201ENST00000268763 CCNB3Q8WWL7 1395 aa23.97■■□□□ 1.43
KSR1-201ENST00000268763 SYNJ1O43426 1573 aa23.96■■□□□ 1.43
KSR1-201ENST00000268763 RAB3GAP2Q9H2M9 1393 aa23.96■■□□□ 1.43
KSR1-201ENST00000268763 NBR1Q14596 966 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms