RNA–Protein interactions for RNA: ENST00000331768.9

SETD3-202, Transcript of SET domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SETD3, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD3-202ENST00000331768 NISCHQ9Y2I1 1504 aa36.53■■■■□ 3.44
SETD3-202ENST00000331768 CCDC180Q9P1Z9 1646 aa31.54■■■□□ 2.64
SETD3-202ENST00000331768 ZCCHC6Q5VYS8 1495 aaKnown RBP30.81■■■□□ 2.52
SETD3-202ENST00000331768 SHROOM4Q9ULL8 1493 aa30.36■■■□□ 2.45
SETD3-202ENST00000331768 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
SETD3-202ENST00000331768 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
SETD3-202ENST00000331768 HRCP23327 699 aa29.57■■■□□ 2.32
SETD3-202ENST00000331768 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
SETD3-202ENST00000331768 SUPT5HO00267 1087 aaKnown RBP29.54■■■□□ 2.32
SETD3-202ENST00000331768 ABCC9O60706 1549 aa29.37■■■□□ 2.29
SETD3-202ENST00000331768 PPARGC1BQ86YN6 1023 aaKnown RBP29.26■■■□□ 2.27
SETD3-202ENST00000331768 NACADO15069 1562 aa29.24■■■□□ 2.27
SETD3-202ENST00000331768 PCGF6Q9BYE7 350 aa29.21■■■□□ 2.27
SETD3-202ENST00000331768 SCRIBQ14160 1630 aa29.18■■■□□ 2.26
SETD3-202ENST00000331768 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
SETD3-202ENST00000331768 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
SETD3-202ENST00000331768 RSF1Q96T23 1441 aaPredicted RBP28.6■■■□□ 2.17
SETD3-202ENST00000331768 CECR2Q9BXF3 1484 aa28.38■■■□□ 2.13
SETD3-202ENST00000331768 PELP1Q8IZL8 1130 aaKnown RBP28.37■■■□□ 2.13
SETD3-202ENST00000331768 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
SETD3-202ENST00000331768 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
SETD3-202ENST00000331768 LOC105371045A0A1W2PR82 267 aa28.26■■■□□ 2.11
SETD3-202ENST00000331768 BAZ1AQ9NRL2 1556 aaPredicted RBP28.17■■■□□ 2.1
SETD3-202ENST00000331768 WIZO95785 1651 aa28.1■■■□□ 2.09
SETD3-202ENST00000331768 SCAF1Q9H7N4 1312 aaKnown RBP28.1■■■□□ 2.09
SETD3-202ENST00000331768 TRIM26Q12899 539 aaPredicted RBP28.02■■■□□ 2.08
SETD3-202ENST00000331768 BICRAQ9NZM4 1560 aa27.98■■■□□ 2.07
SETD3-202ENST00000331768 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
SETD3-202ENST00000331768 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
SETD3-202ENST00000331768 TOP2AP11388 1531 aaKnown RBP27.78■■■□□ 2.04
SETD3-202ENST00000331768 TRIM41Q8WV44 630 aa27.69■■■□□ 2.02
SETD3-202ENST00000331768 ZEB1P37275 1124 aaPredicted RBP27.68■■■□□ 2.02
SETD3-202ENST00000331768 PEG3Q9GZU2 1588 aa27.55■■■□□ 2
SETD3-202ENST00000331768 SMARCA2P51531 1590 aa27.55■■■□□ 2
SETD3-202ENST00000331768 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
SETD3-202ENST00000331768 CCDC88BA6NC98 1476 aa27.53■■■□□ 2
SETD3-202ENST00000331768 EHMT2Q96KQ7 1210 aa27.41■■□□□ 1.98
SETD3-202ENST00000331768 NEUROD1Q13562 356 aa27.36■■□□□ 1.97
SETD3-202ENST00000331768 ATAD2BQ9ULI0 1458 aa27.35■■□□□ 1.97
SETD3-202ENST00000331768 ACIN1Q9UKV3 1341 aaKnown RBP27.33■■□□□ 1.97
SETD3-202ENST00000331768 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
SETD3-202ENST00000331768 BAZ1BQ9UIG0 1483 aaKnown RBP27.26■■□□□ 1.95
SETD3-202ENST00000331768 GTF3C3Q9Y5Q9 886 aa27.25■■□□□ 1.95
SETD3-202ENST00000331768 ABCC8Q09428 1581 aa27.19■■□□□ 1.94
SETD3-202ENST00000331768 MYT1Q01538 1121 aa27.18■■□□□ 1.94
SETD3-202ENST00000331768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.08■■□□□ 1.93
SETD3-202ENST00000331768 HMGXB3Q12766 1538 aa27■■□□□ 1.91
SETD3-202ENST00000331768 CENPBP07199 599 aaPredicted RBP26.99■■□□□ 1.91
SETD3-202ENST00000331768 NCAPD3P42695 1498 aa26.98■■□□□ 1.91
SETD3-202ENST00000331768 CCER1Q8TC90 406 aaPredicted RBP26.98■■□□□ 1.91
SETD3-202ENST00000331768 DIEXFQ68CQ4 756 aaKnown RBP26.94■■□□□ 1.9
SETD3-202ENST00000331768 WRNQ14191 1432 aaPredicted RBP eCLIP26.92■■□□□ 1.9
SETD3-202ENST00000331768 EEA1Q15075 1411 aa26.83■■□□□ 1.89
SETD3-202ENST00000331768 SOGA1O94964 1423 aa26.8■■□□□ 1.88
SETD3-202ENST00000331768 SYNJ1O43426 1573 aa26.78■■□□□ 1.88
SETD3-202ENST00000331768 YTHDC1Q96MU7 727 aaKnown RBP26.77■■□□□ 1.88
SETD3-202ENST00000331768 TTBK1Q5TCY1 1321 aaPredicted RBP26.71■■□□□ 1.87
SETD3-202ENST00000331768 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
SETD3-202ENST00000331768 RUSC2Q8N2Y8 1516 aa26.66■■□□□ 1.86
SETD3-202ENST00000331768 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
SETD3-202ENST00000331768 CFTRP13569 1480 aa26.57■■□□□ 1.84
SETD3-202ENST00000331768 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
SETD3-202ENST00000331768 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
SETD3-202ENST00000331768 TNIKQ9UKE5 1360 aa26.54■■□□□ 1.84
SETD3-202ENST00000331768 GOLGA3Q08378 1498 aa26.52■■□□□ 1.84
SETD3-202ENST00000331768 PRDM2Q13029 1718 aa26.49■■□□□ 1.83
SETD3-202ENST00000331768 CEP162Q5TB80 1403 aa26.47■■□□□ 1.83
SETD3-202ENST00000331768 KIF21BO75037 1637 aa26.45■■□□□ 1.83
SETD3-202ENST00000331768 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
SETD3-202ENST00000331768 UBTFP17480 764 aaKnown RBP26.44■■□□□ 1.82
SETD3-202ENST00000331768 CUX1P39880 1505 aa26.39■■□□□ 1.82
SETD3-202ENST00000331768 CADPSQ9ULU8 1353 aa26.37■■□□□ 1.81
SETD3-202ENST00000331768 ZNF316A6NFI3 1004 aaPredicted RBP26.33■■□□□ 1.81
SETD3-202ENST00000331768 MIER1Q8N108 512 aa26.28■■□□□ 1.8
SETD3-202ENST00000331768 RAPGEF2Q9Y4G8 1499 aa26.22■■□□□ 1.79
SETD3-202ENST00000331768 KIF27Q86VH2 1401 aa26.18■■□□□ 1.78
SETD3-202ENST00000331768 ERICH3Q5RHP9 1530 aa26.15■■□□□ 1.78
SETD3-202ENST00000331768 PRXQ9BXM0 1461 aa26.13■■□□□ 1.77
SETD3-202ENST00000331768 CLIP1P30622 1438 aa26.13■■□□□ 1.77
SETD3-202ENST00000331768 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
SETD3-202ENST00000331768 FGD5Q6ZNL6 1462 aa26.02■■□□□ 1.76
SETD3-202ENST00000331768 CUX2O14529 1486 aa25.99■■□□□ 1.75
SETD3-202ENST00000331768 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
SETD3-202ENST00000331768 NESP48681 1621 aa25.98■■□□□ 1.75
SETD3-202ENST00000331768 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
SETD3-202ENST00000331768 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.75
SETD3-202ENST00000331768 HNRNPUL2Q1KMD3 747 aaKnown RBP25.91■■□□□ 1.74
SETD3-202ENST00000331768 RANGAP1P46060 587 aaPredicted RBP25.88■■□□□ 1.73
SETD3-202ENST00000331768 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
SETD3-202ENST00000331768 IGF1RP08069 1367 aa25.87■■□□□ 1.73
SETD3-202ENST00000331768 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.73
SETD3-202ENST00000331768 APLP2Q06481 763 aa25.81■■□□□ 1.72
SETD3-202ENST00000331768 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
SETD3-202ENST00000331768 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
SETD3-202ENST00000331768 ABCA10Q8WWZ4 1543 aa25.78■■□□□ 1.72
SETD3-202ENST00000331768 CARMIL1Q5VZK9 1371 aa25.78■■□□□ 1.72
SETD3-202ENST00000331768 BCL11AQ9H165 835 aa25.78■■□□□ 1.72
SETD3-202ENST00000331768 ARAP1Q96P48 1450 aa25.77■■□□□ 1.72
SETD3-202ENST00000331768 RAD54L2Q9Y4B4 1467 aa25.75■■□□□ 1.71
SETD3-202ENST00000331768 ANP32EQ9BTT0 268 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms