RNA–Protein interactions for RNA: ENST00000267383.5

CDH24-201, Transcript of cadherin 24, humanhuman

TSL 1 (best) BASIC

Gene CDH24, Length 2,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-201ENST00000267383 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
CDH24-201ENST00000267383 SHROOM4Q9ULL8 1493 aa30.4■■■□□ 2.46
CDH24-201ENST00000267383 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
CDH24-201ENST00000267383 HRCP23327 699 aa29.91■■■□□ 2.38
CDH24-201ENST00000267383 CCDC180Q9P1Z9 1646 aa29.69■■■□□ 2.34
CDH24-201ENST00000267383 PPARGC1BQ86YN6 1023 aaKnown RBP29.57■■■□□ 2.32
CDH24-201ENST00000267383 PCGF6Q9BYE7 350 aa29.57■■■□□ 2.32
CDH24-201ENST00000267383 MYO15BQ96JP2 1530 aa29.46■■■□□ 2.31
CDH24-201ENST00000267383 CHIC1Q5VXU3 224 aa29.26■■■□□ 2.27
CDH24-201ENST00000267383 ZCCHC6Q5VYS8 1495 aaKnown RBP29.16■■■□□ 2.26
CDH24-201ENST00000267383 DCAF8L2P0C7V8 631 aa29.07■■■□□ 2.24
CDH24-201ENST00000267383 LOC105371045A0A1W2PR82 267 aa28.75■■■□□ 2.19
CDH24-201ENST00000267383 DCAF1Q9Y4B6 1507 aa28.55■■■□□ 2.16
CDH24-201ENST00000267383 TRIM26Q12899 539 aaPredicted RBP28.44■■■□□ 2.14
CDH24-201ENST00000267383 PELP1Q8IZL8 1130 aaKnown RBP28.42■■■□□ 2.14
CDH24-201ENST00000267383 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
CDH24-201ENST00000267383 ABCC9O60706 1549 aa28.12■■■□□ 2.09
CDH24-201ENST00000267383 ZEB1P37275 1124 aaPredicted RBP28.03■■■□□ 2.08
CDH24-201ENST00000267383 EHMT2Q96KQ7 1210 aa27.86■■■□□ 2.05
CDH24-201ENST00000267383 FAM9AQ8IZU1 332 aaPredicted RBP27.84■■■□□ 2.05
CDH24-201ENST00000267383 SCRIBQ14160 1630 aa27.82■■■□□ 2.04
CDH24-201ENST00000267383 TRIM41Q8WV44 630 aa27.7■■■□□ 2.03
CDH24-201ENST00000267383 NEUROD1Q13562 356 aa27.62■■■□□ 2.01
CDH24-201ENST00000267383 ACIN1Q9UKV3 1341 aaKnown RBP27.59■■■□□ 2.01
CDH24-201ENST00000267383 NACADO15069 1562 aa27.58■■■□□ 2.01
CDH24-201ENST00000267383 RSF1Q96T23 1441 aaPredicted RBP27.57■■■□□ 2
CDH24-201ENST00000267383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.47■■□□□ 1.99
CDH24-201ENST00000267383 GTF3C3Q9Y5Q9 886 aa27.47■■□□□ 1.99
CDH24-201ENST00000267383 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
CDH24-201ENST00000267383 CCER1Q8TC90 406 aaPredicted RBP27.34■■□□□ 1.97
CDH24-201ENST00000267383 DIEXFQ68CQ4 756 aaKnown RBP27.26■■□□□ 1.95
CDH24-201ENST00000267383 CENPBP07199 599 aaPredicted RBP27.23■■□□□ 1.95
CDH24-201ENST00000267383 MYT1Q01538 1121 aa27.15■■□□□ 1.94
CDH24-201ENST00000267383 TTBK1Q5TCY1 1321 aaPredicted RBP27.15■■□□□ 1.94
CDH24-201ENST00000267383 CECR2Q9BXF3 1484 aa27.08■■□□□ 1.93
CDH24-201ENST00000267383 YTHDC1Q96MU7 727 aaKnown RBP27.02■■□□□ 1.92
CDH24-201ENST00000267383 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
CDH24-201ENST00000267383 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
CDH24-201ENST00000267383 WIZO95785 1651 aa26.84■■□□□ 1.89
CDH24-201ENST00000267383 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
CDH24-201ENST00000267383 ZNF316A6NFI3 1004 aaPredicted RBP26.69■■□□□ 1.86
CDH24-201ENST00000267383 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
CDH24-201ENST00000267383 MIER1Q8N108 512 aa26.62■■□□□ 1.85
CDH24-201ENST00000267383 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
CDH24-201ENST00000267383 ABCC8Q09428 1581 aa26.57■■□□□ 1.84
CDH24-201ENST00000267383 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
CDH24-201ENST00000267383 SMARCA4P51532 1647 aa26.5■■□□□ 1.83
CDH24-201ENST00000267383 EIF4G1Q04637 1599 aaKnown RBP26.49■■□□□ 1.83
CDH24-201ENST00000267383 CEP162Q5TB80 1403 aa26.47■■□□□ 1.83
CDH24-201ENST00000267383 SOGA1O94964 1423 aa26.44■■□□□ 1.82
CDH24-201ENST00000267383 UBTFP17480 764 aaKnown RBP26.39■■□□□ 1.82
CDH24-201ENST00000267383 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.815e-6■■■■■ 29.2
CDH24-201ENST00000267383 HNRNPUL2Q1KMD3 747 aaKnown RBP26.35■■□□□ 1.81
CDH24-201ENST00000267383 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
CDH24-201ENST00000267383 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
CDH24-201ENST00000267383 CSRNP3Q8WYN3 585 aa26.25■■□□□ 1.79
CDH24-201ENST00000267383 TNIKQ9UKE5 1360 aa26.25■■□□□ 1.79
CDH24-201ENST00000267383 SMARCA2P51531 1590 aa26.16■■□□□ 1.78
CDH24-201ENST00000267383 SUPT16HQ9Y5B9 1047 aaKnown RBP26.11■■□□□ 1.77
CDH24-201ENST00000267383 RANGAP1P46060 587 aaPredicted RBP26.08■■□□□ 1.77
CDH24-201ENST00000267383 GOLGA3Q08378 1498 aa26■■□□□ 1.75
CDH24-201ENST00000267383 PEG3Q9GZU2 1588 aa25.97■■□□□ 1.75
CDH24-201ENST00000267383 ATAD2BQ9ULI0 1458 aa25.96■■□□□ 1.75
CDH24-201ENST00000267383 TSHZ2Q9NRE2 1034 aa25.96■■□□□ 1.75
CDH24-201ENST00000267383 EEA1Q15075 1411 aa25.94■■□□□ 1.74
CDH24-201ENST00000267383 ANP32EQ9BTT0 268 aa25.89■■□□□ 1.73
CDH24-201ENST00000267383 BAZ1BQ9UIG0 1483 aaKnown RBP25.87■■□□□ 1.73
CDH24-201ENST00000267383 CLIP1P30622 1438 aa25.84■■□□□ 1.73
CDH24-201ENST00000267383 BCANQ96GW7 911 aa25.81■■□□□ 1.72
CDH24-201ENST00000267383 BCL11AQ9H165 835 aa25.8■■□□□ 1.72
CDH24-201ENST00000267383 APLP2Q06481 763 aa25.79■■□□□ 1.72
CDH24-201ENST00000267383 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
CDH24-201ENST00000267383 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
CDH24-201ENST00000267383 CLSPNQ9HAW4 1339 aa25.74■■□□□ 1.71
CDH24-201ENST00000267383 VPS8Q8N3P4 1428 aa25.71■■□□□ 1.71
CDH24-201ENST00000267383 KCNH8Q96L42 1107 aa25.71■■□□□ 1.71
CDH24-201ENST00000267383 RAPGEF2Q9Y4G8 1499 aa25.7■■□□□ 1.7
CDH24-201ENST00000267383 KIF21BO75037 1637 aa25.63■■□□□ 1.69
CDH24-201ENST00000267383 DHX57Q6P158 1386 aaKnown RBP25.6■■□□□ 1.69
CDH24-201ENST00000267383 FKBP8Q14318 412 aa25.53■■□□□ 1.68
CDH24-201ENST00000267383 KANK4Q5T7N3 995 aaPredicted RBP25.53■■□□□ 1.68
CDH24-201ENST00000267383 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
CDH24-201ENST00000267383 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
CDH24-201ENST00000267383 ITGAEP38570 1179 aa25.44■■□□□ 1.66
CDH24-201ENST00000267383 RBM19Q9Y4C8 960 aaKnown RBP25.37■■□□□ 1.65
CDH24-201ENST00000267383 ARAP1Q96P48 1450 aa25.33■■□□□ 1.65
CDH24-201ENST00000267383 DDX10Q13206 875 aaKnown RBP25.31■■□□□ 1.64
CDH24-201ENST00000267383 CC2D2AQ9P2K1 1620 aa25.29■■□□□ 1.64
CDH24-201ENST00000267383 TRIM52Q96A61 297 aa25.27■■□□□ 1.64
CDH24-201ENST00000267383 NEFLP07196 543 aa25.24■■□□□ 1.63
CDH24-201ENST00000267383 HIRIP3Q9BW71 556 aaPredicted RBP25.21■■□□□ 1.63
CDH24-201ENST00000267383 TOP2BQ02880 1626 aa25.21■■□□□ 1.63
CDH24-201ENST00000267383 PRXQ9BXM0 1461 aa25.18■■□□□ 1.62
CDH24-201ENST00000267383 CFTRP13569 1480 aa25.17■■□□□ 1.62
CDH24-201ENST00000267383 MSH5O43196 834 aa25.15■■□□□ 1.62
CDH24-201ENST00000267383 RRBP1Q9P2E9 1410 aaKnown RBP25.15■■□□□ 1.62
CDH24-201ENST00000267383 CCNB3Q8WWL7 1395 aa25.13■■□□□ 1.61
CDH24-201ENST00000267383 CUX1P39880 1505 aa25.09■■□□□ 1.61
CDH24-201ENST00000267383 SIN3AQ96ST3 1273 aa25.09■■□□□ 1.61
CDH24-201ENST00000267383 ERICH3Q5RHP9 1530 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms