RNA–Protein interactions for RNA: ENST00000287020.6

GDF6-201, Transcript of growth differentiation factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF6, Length 3,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF6-201ENST00000287020 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
GDF6-201ENST00000287020 PCGF6Q9BYE7 350 aa27.13■■□□□ 1.93
GDF6-201ENST00000287020 HRCP23327 699 aa27.02■■□□□ 1.92
GDF6-201ENST00000287020 PPARGC1BQ86YN6 1023 aaKnown RBP27.02■■□□□ 1.92
GDF6-201ENST00000287020 PELP1Q8IZL8 1130 aaKnown RBP27.02■■□□□ 1.92
GDF6-201ENST00000287020 SUPT5HO00267 1087 aaKnown RBP26.97■■□□□ 1.91
GDF6-201ENST00000287020 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
GDF6-201ENST00000287020 MYT1Q01538 1121 aa26.13■■□□□ 1.77
GDF6-201ENST00000287020 SCAF1Q9H7N4 1312 aaKnown RBP25.89■■□□□ 1.73
GDF6-201ENST00000287020 EHMT2Q96KQ7 1210 aa25.82■■□□□ 1.72
GDF6-201ENST00000287020 DCAF8L2P0C7V8 631 aa25.72■■□□□ 1.71
GDF6-201ENST00000287020 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
GDF6-201ENST00000287020 CENPBP07199 599 aaPredicted RBP25.57■■□□□ 1.68
GDF6-201ENST00000287020 ZEB1P37275 1124 aaPredicted RBP25.53■■□□□ 1.68
GDF6-201ENST00000287020 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
GDF6-201ENST00000287020 GTF3C3Q9Y5Q9 886 aa25.51■■□□□ 1.67
GDF6-201ENST00000287020 TRIM26Q12899 539 aaPredicted RBP25.5■■□□□ 1.67
GDF6-201ENST00000287020 YTHDC1Q96MU7 727 aaKnown RBP25.48■■□□□ 1.67
GDF6-201ENST00000287020 FAM9AQ8IZU1 332 aaPredicted RBP25.28■■□□□ 1.64
GDF6-201ENST00000287020 ACIN1Q9UKV3 1341 aaKnown RBP25.28■■□□□ 1.64
GDF6-201ENST00000287020 NEUROD1Q13562 356 aa25.25■■□□□ 1.63
GDF6-201ENST00000287020 CCER1Q8TC90 406 aaPredicted RBP25.18■■□□□ 1.62
GDF6-201ENST00000287020 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
GDF6-201ENST00000287020 MYO15BQ96JP2 1530 aa25.06■■□□□ 1.6
GDF6-201ENST00000287020 DIEXFQ68CQ4 756 aaKnown RBP24.96■■□□□ 1.59
GDF6-201ENST00000287020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
GDF6-201ENST00000287020 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
GDF6-201ENST00000287020 BCL11AQ9H165 835 aa24.52■■□□□ 1.52
GDF6-201ENST00000287020 DCAF1Q9Y4B6 1507 aa24.49■■□□□ 1.51
GDF6-201ENST00000287020 ERICH6Q7L0X2 663 aa24.31■■□□□ 1.48
GDF6-201ENST00000287020 BCANQ96GW7 911 aa24.3■■□□□ 1.48
GDF6-201ENST00000287020 ANP32EQ9BTT0 268 aa24.14■■□□□ 1.45
GDF6-201ENST00000287020 ZNF316A6NFI3 1004 aaPredicted RBP24.12■■□□□ 1.45
GDF6-201ENST00000287020 MIER1Q8N108 512 aa24.09■■□□□ 1.45
GDF6-201ENST00000287020 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
GDF6-201ENST00000287020 CSRNP3Q8WYN3 585 aa23.99■■□□□ 1.43
GDF6-201ENST00000287020 HNRNPUL2Q1KMD3 747 aaKnown RBP23.97■■□□□ 1.43
GDF6-201ENST00000287020 NEFLP07196 543 aa23.91■■□□□ 1.42
GDF6-201ENST00000287020 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
GDF6-201ENST00000287020 SUPT16HQ9Y5B9 1047 aaKnown RBP23.73■■□□□ 1.39
GDF6-201ENST00000287020 TSHZ2Q9NRE2 1034 aa23.69■■□□□ 1.38
GDF6-201ENST00000287020 UBTFP17480 764 aaKnown RBP23.65■■□□□ 1.38
GDF6-201ENST00000287020 FKBP8Q14318 412 aa23.65■■□□□ 1.38
GDF6-201ENST00000287020 APLP2Q06481 763 aa23.64■■□□□ 1.38
GDF6-201ENST00000287020 ITGAEP38570 1179 aa23.62■■□□□ 1.37
GDF6-201ENST00000287020 PRKCSHP14314 528 aaPredicted RBP23.61■■□□□ 1.37
GDF6-201ENST00000287020 NBR1Q14596 966 aa23.35■■□□□ 1.33
GDF6-201ENST00000287020 RBM19Q9Y4C8 960 aaKnown RBP23.32■■□□□ 1.32
GDF6-201ENST00000287020 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
GDF6-201ENST00000287020 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
GDF6-201ENST00000287020 TRIM52Q96A61 297 aa23.24■■□□□ 1.31
GDF6-201ENST00000287020 RTN4Q9NQC3 1192 aaKnown RBP23.24■■□□□ 1.31
GDF6-201ENST00000287020 RTL5Q5HYW3 569 aaPredicted RBP23.23■■□□□ 1.31
GDF6-201ENST00000287020 IRX6P78412 446 aaPredicted RBP23.22■■□□□ 1.31
GDF6-201ENST00000287020 EIF5BO60841 1220 aaKnown RBP23.21■■□□□ 1.31
GDF6-201ENST00000287020 CCDC136Q96JN2 1154 aa23.15■■□□□ 1.3
GDF6-201ENST00000287020 DEKP35659 375 aaKnown RBP23.13■■□□□ 1.29
GDF6-201ENST00000287020 ANO8Q9HCE9 1232 aaPredicted RBP23.1■■□□□ 1.29
GDF6-201ENST00000287020 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.04■■□□□ 1.28
GDF6-201ENST00000287020 DDX10Q13206 875 aaKnown RBP23.04■■□□□ 1.28
GDF6-201ENST00000287020 KCNH8Q96L42 1107 aa23.03■■□□□ 1.28
GDF6-201ENST00000287020 CNGB1Q14028 1251 aaPredicted RBP23■■□□□ 1.27
GDF6-201ENST00000287020 HIRIP3Q9BW71 556 aaPredicted RBP22.92■■□□□ 1.26
GDF6-201ENST00000287020 ZCCHC6Q5VYS8 1495 aaKnown RBP22.89■■□□□ 1.26
GDF6-201ENST00000287020 ANP32CO43423 234 aa22.84■■□□□ 1.25
GDF6-201ENST00000287020 MYT1LQ9UL68 1186 aa22.82■■□□□ 1.24
GDF6-201ENST00000287020 NPM2Q86SE8 214 aaKnown RBP22.81■■□□□ 1.24
GDF6-201ENST00000287020 SALL2Q9Y467 1007 aaPredicted RBP22.79■■□□□ 1.24
GDF6-201ENST00000287020 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
GDF6-201ENST00000287020 MSH5O43196 834 aa22.75■■□□□ 1.23
GDF6-201ENST00000287020 ANP32AP39687 249 aaKnown RBP22.7■■□□□ 1.22
GDF6-201ENST00000287020 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
GDF6-201ENST00000287020 ZBTB47Q9UFB7 747 aaPredicted RBP22.62■■□□□ 1.21
GDF6-201ENST00000287020 NOP58Q9Y2X3 529 aaKnown RBP22.62■■□□□ 1.21
GDF6-201ENST00000287020 B4GALNT3Q6L9W6 998 aa22.6■■□□□ 1.21
GDF6-201ENST00000287020 CEP162Q5TB80 1403 aa22.58■■□□□ 1.21
GDF6-201ENST00000287020 DAXXQ9UER7 740 aaPredicted RBP22.56■■□□□ 1.2
GDF6-201ENST00000287020 POLR3GLQ9BT43 218 aa22.54■■□□□ 1.2
GDF6-201ENST00000287020 SENP3-EIF4A1A0A087X0R7 540 aa22.53■■□□□ 1.2
GDF6-201ENST00000287020 IL27Q8NEV9 243 aa22.53■■□□□ 1.2
GDF6-201ENST00000287020 LAS1LQ9Y4W2 734 aaKnown RBP22.53■■□□□ 1.2
GDF6-201ENST00000287020 FAM9BQ8IZU0 186 aa22.47■■□□□ 1.19
GDF6-201ENST00000287020 FANCIQ9NVI1 1328 aa22.41■■□□□ 1.18
GDF6-201ENST00000287020 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.18
GDF6-201ENST00000287020 RSF1Q96T23 1441 aaPredicted RBP22.39■■□□□ 1.17
GDF6-201ENST00000287020 NEFMP07197 916 aa22.38■■□□□ 1.17
GDF6-201ENST00000287020 PAK3O75914 559 aaPredicted RBP22.34■■□□□ 1.17
GDF6-201ENST00000287020 PPP4R2Q9NY27 417 aa22.33■■□□□ 1.16
GDF6-201ENST00000287020 ARXQ96QS3 562 aa22.32■■□□□ 1.16
GDF6-201ENST00000287020 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
GDF6-201ENST00000287020 ERICH6BQ5W0A0 696 aa22.29■■□□□ 1.16
GDF6-201ENST00000287020 TIMELESSQ9UNS1 1208 aa22.28■■□□□ 1.16
GDF6-201ENST00000287020 RB1CC1Q8TDY2 1594 aa22.21■■□□□ 1.15
GDF6-201ENST00000287020 GLIPR1L2Q4G1C9 344 aa22.19■■□□□ 1.14
GDF6-201ENST00000287020 TNIKQ9UKE5 1360 aa22.16■■□□□ 1.14
GDF6-201ENST00000287020 MRS2Q9HD23 443 aa22.14■■□□□ 1.13
GDF6-201ENST00000287020 SOGA1O94964 1423 aa22.11■■□□□ 1.13
GDF6-201ENST00000287020 CLIP1P30622 1438 aa22.1■■□□□ 1.13
GDF6-201ENST00000287020 IPO9Q96P70 1041 aaKnown RBP22.1■■□□□ 1.13
GDF6-201ENST00000287020 DHX57Q6P158 1386 aaKnown RBP22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms