Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
LTBP4Q8N2S1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
LTBP4Q8N2S1 AC110285.5-201ENST00000611501 352 ntBASIC29.82■■■□□ 2.36
LTBP4Q8N2S1 OR7E47P-201ENST00000546390 1422 ntBASIC29.82■■■□□ 2.36
LTBP4Q8N2S1 KRT8P9-201ENST00000558927 1449 ntBASIC29.82■■■□□ 2.36
LTBP4Q8N2S1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 AC073508.3-201ENST00000619697 1419 ntBASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 TERF1P1-201ENST00000311003 1181 ntBASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 DUX4L26-201ENST00000489078 1255 ntBASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC29.81■■■□□ 2.36
LTBP4Q8N2S1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC29.8■■■□□ 2.36
LTBP4Q8N2S1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.8■■■□□ 2.36
LTBP4Q8N2S1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
LTBP4Q8N2S1 NMU-205ENST00000511469 756 ntTSL 3 BASIC29.8■■■□□ 2.36
LTBP4Q8N2S1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
LTBP4Q8N2S1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LTBP4Q8N2S1 AL353803.4-201ENST00000565882 1934 ntBASIC29.8■■■□□ 2.36
LTBP4Q8N2S1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
LTBP4Q8N2S1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC29.79■■■□□ 2.36
LTBP4Q8N2S1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 DUSP8P4-201ENST00000399538 1761 ntBASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 AC135731.1-201ENST00000569415 2548 ntBASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC29.78■■■□□ 2.36
LTBP4Q8N2S1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
LTBP4Q8N2S1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
LTBP4Q8N2S1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
LTBP4Q8N2S1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC29.77■■■□□ 2.36
LTBP4Q8N2S1 DUT-205ENST00000558813 769 ntTSL 2 BASIC29.77■■■□□ 2.36
LTBP4Q8N2S1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC29.77■■■□□ 2.36
LTBP4Q8N2S1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
LTBP4Q8N2S1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
LTBP4Q8N2S1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC29.76■■■□□ 2.36
LTBP4Q8N2S1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.36
LTBP4Q8N2S1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC29.76■■■□□ 2.35
LTBP4Q8N2S1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
LTBP4Q8N2S1 KRASP1-201ENST00000407852 552 ntBASIC29.76■■■□□ 2.35
LTBP4Q8N2S1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC29.76■■■□□ 2.35
LTBP4Q8N2S1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
LTBP4Q8N2S1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
LTBP4Q8N2S1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC29.75■■■□□ 2.35
LTBP4Q8N2S1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC29.75■■■□□ 2.35
LTBP4Q8N2S1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC29.75■■■□□ 2.35
LTBP4Q8N2S1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC29.75■■■□□ 2.35
LTBP4Q8N2S1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC29.75■■■□□ 2.35
LTBP4Q8N2S1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC29.75■■■□□ 2.35
LTBP4Q8N2S1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
LTBP4Q8N2S1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
LTBP4Q8N2S1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LTBP4Q8N2S1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LTBP4Q8N2S1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC29.74■■■□□ 2.35
LTBP4Q8N2S1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC29.74■■■□□ 2.35
LTBP4Q8N2S1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LTBP4Q8N2S1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LTBP4Q8N2S1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
LTBP4Q8N2S1 KRT126P-201ENST00000549467 1181 ntBASIC29.74■■■□□ 2.35
LTBP4Q8N2S1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
LTBP4Q8N2S1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
LTBP4Q8N2S1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC29.73■■■□□ 2.35
LTBP4Q8N2S1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC29.73■■■□□ 2.35
LTBP4Q8N2S1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC29.73■■■□□ 2.35
LTBP4Q8N2S1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC29.73■■■□□ 2.35
LTBP4Q8N2S1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 AC079089.2-201ENST00000531211 1277 ntBASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 AC087388.1-201ENST00000571370 1112 ntBASIC29.72■■■□□ 2.35
LTBP4Q8N2S1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms