Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YJL032WYJL032W 315 nt3.63□□□□□ -1.83
SUB1P54000 YLR169WYLR169W 354 nt3.63□□□□□ -1.83
SUB1P54000 ARC18YLR370C 537 nt3.63□□□□□ -1.83
SUB1P54000 RAD33YML011C 534 nt3.63□□□□□ -1.83
SUB1P54000 ATP11YNL315C 957 nt3.63□□□□□ -1.83
SUB1P54000 PEP4YPL154C 1218 nt3.63□□□□□ -1.83
SUB1P54000 TFB1YDR311W 1929 nt3.63□□□□□ -1.83
SUB1P54000 UTP14YML093W 2700 nt3.62□□□□□ -1.83
SUB1P54000 FUR1YHR128W 651 nt3.62□□□□□ -1.83
SUB1P54000 CMC1YKL137W 336 nt3.62□□□□□ -1.83
SUB1P54000 YKL162C-AYKL162C-A 153 nt3.62□□□□□ -1.83
SUB1P54000 YLR339CYLR339C 552 nt3.62□□□□□ -1.83
SUB1P54000 KAR4YCL055W 1008 nt3.62□□□□□ -1.83
SUB1P54000 SIN3YOL004W 4611 nt3.62□□□□□ -1.83
SUB1P54000 SRD1YCR018C 666 nt3.61□□□□□ -1.83
SUB1P54000 FAP7YDL166C 594 nt3.61□□□□□ -1.83
SUB1P54000 VAB2YEL005C 849 nt3.61□□□□□ -1.83
SUB1P54000 RSR1YGR152C 819 nt3.61□□□□□ -1.83
SUB1P54000 GOS1YHL031C 672 nt3.61□□□□□ -1.83
SUB1P54000 COX23YHR116W 456 nt3.61□□□□□ -1.83
SUB1P54000 SFT1YKL006C-A 294 nt3.61□□□□□ -1.83
SUB1P54000 YKR070WYKR070W 1059 nt3.61□□□□□ -1.83
SUB1P54000 LIP2YLR239C 987 nt3.61□□□□□ -1.83
SUB1P54000 NOP12YOL041C 1380 nt3.61□□□□□ -1.83
SUB1P54000 MAK11YKL021C 1407 nt3.61□□□□□ -1.83
SUB1P54000 FRT2YAL028W 1587 nt3.6□□□□□ -1.83
SUB1P54000 HPA3YEL066W 540 nt3.6□□□□□ -1.83
SUB1P54000 RPN1YHR027C 2982 nt3.6□□□□□ -1.83
SUB1P54000 SVP26YHR181W 687 nt3.6□□□□□ -1.83
SUB1P54000 RPL23AYBL087C 414 nt3.6□□□□□ -1.83
SUB1P54000 SWC4YGR002C 1431 nt3.6□□□□□ -1.83
SUB1P54000 CDC55YGL190C 1581 nt3.59□□□□□ -1.83
SUB1P54000 MET6YER091C 2304 nt3.59□□□□□ -1.83
SUB1P54000 SAE2YGL175C 1038 nt3.59□□□□□ -1.83
SUB1P54000 ERV1YGR029W 570 nt3.59□□□□□ -1.83
SUB1P54000 YIR021W-AYIR021W-A 213 nt3.59□□□□□ -1.83
SUB1P54000 RPF2YKR081C 1035 nt3.59□□□□□ -1.83
SUB1P54000 SDO1YLR022C 753 nt3.59□□□□□ -1.83
SUB1P54000 YLR230WYLR230W 306 nt3.59□□□□□ -1.83
SUB1P54000 BTS1YPL069C 1008 nt3.59□□□□□ -1.83
SUB1P54000 CMD1YBR109C 444 nt3.59□□□□□ -1.83
SUB1P54000 SPT14YPL175W 1359 nt3.59□□□□□ -1.83
SUB1P54000 GEA1YJR031C 4227 nt3.59□□□□□ -1.84
SUB1P54000 SSN2YDR443C 4263 nt3.59□□□□□ -1.84
SUB1P54000 ARP5YNL059C 2268 nt3.59□□□□□ -1.84
SUB1P54000 AI2Q0055 2565 nt3.58□□□□□ -1.84
SUB1P54000 SUL1YBR294W 2580 nt3.58□□□□□ -1.84
SUB1P54000 CWC22YGR278W 1734 nt3.58□□□□□ -1.84
SUB1P54000 FIN1YDR130C 876 nt3.58□□□□□ -1.84
SUB1P54000 TIM11YDR322C-A 291 nt3.58□□□□□ -1.84
SUB1P54000 OST5YGL226C-A 261 nt3.58□□□□□ -1.84
SUB1P54000 RFA3YJL173C 369 nt3.58□□□□□ -1.84
SUB1P54000 RPS21AYKR057W 264 nt3.58□□□□□ -1.84
SUB1P54000 DYN3YMR299C 939 nt3.58□□□□□ -1.84
SUB1P54000 YNL089CYNL089C 477 nt3.58□□□□□ -1.84
SUB1P54000 YSF3YNL138W-A 258 nt3.58□□□□□ -1.84
SUB1P54000 GIS2YNL255C 462 nt3.58□□□□□ -1.84
SUB1P54000 RPC40YPR110C 1008 nt3.58□□□□□ -1.84
SUB1P54000 RFC5YBR087W 1065 nt3.58□□□□□ -1.84
SUB1P54000 PEX34YCL056C 435 nt3.58□□□□□ -1.84
SUB1P54000 FAR1YJL157C 2493 nt3.58□□□□□ -1.84
SUB1P54000 YEL025CYEL025C 3567 nt3.57□□□□□ -1.84
SUB1P54000 MIT1YEL007W 2001 nt3.57□□□□□ -1.84
SUB1P54000 SPT10YJL127C 1923 nt3.57□□□□□ -1.84
SUB1P54000 RAX2YLR084C 3663 nt3.57□□□□□ -1.84
SUB1P54000 PSY4YBL046W 1326 nt3.57□□□□□ -1.84
SUB1P54000 POM152YMR129W 4014 nt3.56□□□□□ -1.84
SUB1P54000 BIT61YJL058C 1632 nt3.56□□□□□ -1.84
SUB1P54000 RPA14YDR156W 414 nt3.56□□□□□ -1.84
SUB1P54000 YHR180WYHR180W 492 nt3.56□□□□□ -1.84
SUB1P54000 GPN3YLR243W 819 nt3.56□□□□□ -1.84
SUB1P54000 NGL1YOL042W 1092 nt3.56□□□□□ -1.84
SUB1P54000 YBR090CYBR090C 369 nt3.56□□□□□ -1.84
SUB1P54000 ERT1YBR239C 1590 nt3.55□□□□□ -1.84
SUB1P54000 COM2YER130C 1332 nt3.55□□□□□ -1.84
SUB1P54000 ERG28YER044C 447 nt3.55□□□□□ -1.84
SUB1P54000 GTR2YGR163W 1026 nt3.55□□□□□ -1.84
SUB1P54000 YJL175WYJL175W 513 nt3.55□□□□□ -1.84
SUB1P54000 YKL115CYKL115C 393 nt3.55□□□□□ -1.84
SUB1P54000 YMR181CYMR181C 465 nt3.55□□□□□ -1.84
SUB1P54000 RPB8YOR224C 441 nt3.55□□□□□ -1.84
SUB1P54000 RRD2YPL152W 1077 nt3.55□□□□□ -1.84
SUB1P54000 DBF20YPR111W 1695 nt3.55□□□□□ -1.84
SUB1P54000 CHA4YLR098C 1947 nt3.54□□□□□ -1.84
SUB1P54000 JJJ2YJL162C 1752 nt3.54□□□□□ -1.84
SUB1P54000 APC11YDL008W 498 nt3.54□□□□□ -1.84
SUB1P54000 DYN2YDR424C 279 nt3.54□□□□□ -1.84
SUB1P54000 GEP7YGL057C 864 nt3.54□□□□□ -1.84
SUB1P54000 MVB12YGR206W 306 nt3.54□□□□□ -1.84
SUB1P54000 MRPL20YKR085C 588 nt3.54□□□□□ -1.84
SUB1P54000 YBL062WYBL062W 381 nt3.54□□□□□ -1.84
SUB1P54000 TIR2YOR010C 756 nt3.54□□□□□ -1.84
SUB1P54000 MRPL40YPL173W 894 nt3.54□□□□□ -1.84
SUB1P54000 CSR2YPR030W 3366 nt3.53□□□□□ -1.84
SUB1P54000 SRP1YNL189W 1629 nt3.53□□□□□ -1.84
SUB1P54000 ARK1YNL020C 1917 nt3.53□□□□□ -1.84
SUB1P54000 PUG1YER185W 912 nt3.53□□□□□ -1.84
SUB1P54000 YKL069WYKL069W 543 nt3.53□□□□□ -1.84
SUB1P54000 AIM36YMR157C 768 nt3.53□□□□□ -1.84
SUB1P54000 YNL057WYNL057W 333 nt3.53□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 55.5 ms