Protein–RNA interactions for Protein: P21771

MRPS28, 37S ribosomal protein S28, mitochondrial, yeast

Predictions only

Length 286 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	P21771	YIL156W-A	YIL156W-A	402 nt		2.37	□□□□□ -2.03
MRPS28	P21771	YAL059C-A	YAL059C-A	423 nt		2.37	□□□□□ -2.03
MRPS28	P21771	YNL184C	YNL184C	327 nt		2.37	□□□□□ -2.03
MRPS28	P21771	HRT1	YOL133W	366 nt		2.37	□□□□□ -2.03
MRPS28	P21771	YPL071C	YPL071C	471 nt		2.37	□□□□□ -2.03
MRPS28	P21771	ISU1	YPL135W	498 nt		2.37	□□□□□ -2.03
MRPS28	P21771	STH1	YIL126W	4080 nt		2.37	□□□□□ -2.03
MRPS28	P21771	PIN4	YBL051C	2007 nt		2.36	□□□□□ -2.03
MRPS28	P21771	YCR015C	YCR015C	954 nt		2.36	□□□□□ -2.03
MRPS28	P21771	YDL050C	YDL050C	372 nt		2.36	□□□□□ -2.03
MRPS28	P21771	YGR039W	YGR039W	312 nt		2.36	□□□□□ -2.03
MRPS28	P21771	PAU23	YLR037C	375 nt		2.36	□□□□□ -2.03
MRPS28	P21771	RIM9	YMR063W	720 nt		2.36	□□□□□ -2.03
MRPS28	P21771	YMR310C	YMR310C	954 nt		2.36	□□□□□ -2.03
MRPS28	P21771	UBP2	YOR124C	3819 nt		2.36	□□□□□ -2.03
MRPS28	P21771	YPL035C	YPL035C	348 nt		2.36	□□□□□ -2.03
MRPS28	P21771	YCG1	YDR325W	3108 nt		2.36	□□□□□ -2.03
MRPS28	P21771	RGR1	YLR071C	3249 nt		2.35	□□□□□ -2.03
MRPS28	P21771	BNI1	YNL271C	5862 nt		2.35	□□□□□ -2.03
MRPS28	P21771	TAE2	YPL009C	3117 nt		2.35	□□□□□ -2.03
MRPS28	P21771	NSA2	YER126C	786 nt		2.35	□□□□□ -2.03
MRPS28	P21771	TAN1	YGL232W	870 nt		2.35	□□□□□ -2.03
MRPS28	P21771	YHR180W-A	YHR180W-A	183 nt		2.35	□□□□□ -2.03
MRPS28	P21771	INP1	YMR204C	1263 nt		2.35	□□□□□ -2.03
MRPS28	P21771	YSF3	YNL138W-A	258 nt		2.35	□□□□□ -2.03
MRPS28	P21771	snR34	snR34	203 nt		2.35	□□□□□ -2.03
MRPS28	P21771	SSD1	YDR293C	3753 nt		2.35	□□□□□ -2.03
MRPS28	P21771	MNT3	YIL014W	1893 nt		2.35	□□□□□ -2.03
MRPS28	P21771	TPO5	YKL174C	1857 nt		2.35	□□□□□ -2.03
MRPS28	P21771	YCK2	YNL154C	1641 nt		2.35	□□□□□ -2.03
MRPS28	P21771	HUL5	YGL141W	2733 nt		2.34	□□□□□ -2.03
MRPS28	P21771	ADH4	YGL256W	1149 nt		2.34	□□□□□ -2.03
MRPS28	P21771	DCG1	YIR030C	735 nt		2.34	□□□□□ -2.03
MRPS28	P21771	GPI14	YJR013W	1212 nt		2.34	□□□□□ -2.03
MRPS28	P21771	YKL156C-A	YKL156C-A	117 nt		2.34	□□□□□ -2.03
MRPS28	P21771	BLS1	YLR408C	369 nt		2.34	□□□□□ -2.03
MRPS28	P21771	YNL203C	YNL203C	612 nt		2.34	□□□□□ -2.03
MRPS28	P21771	YBL081W	YBL081W	1107 nt		2.34	□□□□□ -2.03
MRPS28	P21771	MRP2	YPR166C	348 nt		2.34	□□□□□ -2.03
MRPS28	P21771	ORC2	YBR060C	1863 nt		2.34	□□□□□ -2.03
MRPS28	P21771	RDS2	YPL133C	1341 nt		2.34	□□□□□ -2.04
MRPS28	P21771	SAP185	YJL098W	3177 nt		2.34	□□□□□ -2.04
MRPS28	P21771	CET1	YPL228W	1650 nt		2.34	□□□□□ -2.04
MRPS28	P21771	HFM1	YGL251C	3564 nt		2.33	□□□□□ -2.04
MRPS28	P21771	ORC1	YML065W	2745 nt		2.33	□□□□□ -2.04
MRPS28	P21771	DDI2	YFL061W	678 nt		2.33	□□□□□ -2.04
MRPS28	P21771	PTI1	YGR156W	1278 nt		2.33	□□□□□ -2.04
MRPS28	P21771	EPT1	YHR123W	1176 nt		2.33	□□□□□ -2.04
MRPS28	P21771	SNX4	YJL036W	1272 nt		2.33	□□□□□ -2.04
MRPS28	P21771	YLL044W	YLL044W	447 nt		2.33	□□□□□ -2.04
MRPS28	P21771	MRPL27	YBR282W	441 nt		2.33	□□□□□ -2.04
MRPS28	P21771	TOP2	YNL088W	4287 nt		2.33	□□□□□ -2.04
MRPS28	P21771	NMA111	YNL123W	2994 nt		2.32	□□□□□ -2.04
MRPS28	P21771	YHR078W	YHR078W	1659 nt		2.32	□□□□□ -2.04
MRPS28	P21771	YCR064C	YCR064C	411 nt		2.32	□□□□□ -2.04
MRPS28	P21771	RRP42	YDL111C	798 nt		2.32	□□□□□ -2.04
MRPS28	P21771	LRS4	YDR439W	1044 nt		2.32	□□□□□ -2.04
MRPS28	P21771	DOG1	YHR044C	741 nt		2.32	□□□□□ -2.04
MRPS28	P21771	PCL7	YIL050W	858 nt		2.32	□□□□□ -2.04
MRPS28	P21771	USB1	YLR132C	873 nt		2.32	□□□□□ -2.04
MRPS28	P21771	YLR290C	YLR290C	834 nt		2.32	□□□□□ -2.04
MRPS28	P21771	TRM112	YNR046W	408 nt		2.32	□□□□□ -2.04
MRPS28	P21771	MSN1	YOL116W	1149 nt		2.32	□□□□□ -2.04
MRPS28	P21771	YOR062C	YOR062C	807 nt		2.32	□□□□□ -2.04
MRPS28	P21771	SYC1	YOR179C	567 nt		2.32	□□□□□ -2.04
MRPS28	P21771	RPS10A	YOR293W	318 nt		2.32	□□□□□ -2.04
MRPS28	P21771	YOR331C	YOR331C	558 nt		2.32	□□□□□ -2.04
MRPS28	P21771	GPI2	YPL076W	843 nt		2.32	□□□□□ -2.04
MRPS28	P21771	MUM2	YBR057C	1101 nt		2.32	□□□□□ -2.04
MRPS28	P21771	VIP1	YLR410W	3441 nt		2.32	□□□□□ -2.04
MRPS28	P21771	ITT1	YML068W	1395 nt		2.32	□□□□□ -2.04
MRPS28	P21771	SPP41	YDR464W	4308 nt		2.31	□□□□□ -2.04
MRPS28	P21771	YDL241W	YDL241W	372 nt		2.31	□□□□□ -2.04
MRPS28	P21771	HTA1	YDR225W	399 nt		2.31	□□□□□ -2.04
MRPS28	P21771	RMD5	YDR255C	1266 nt		2.31	□□□□□ -2.04
MRPS28	P21771	SAY1	YGR263C	1275 nt		2.31	□□□□□ -2.04
MRPS28	P21771	AYR1	YIL124W	894 nt		2.31	□□□□□ -2.04
MRPS28	P21771	TFA2	YKR062W	987 nt		2.31	□□□□□ -2.04
MRPS28	P21771	RMP1	YLR145W	606 nt		2.31	□□□□□ -2.04
MRPS28	P21771	YNL162W-A	YNL162W-A	219 nt		2.31	□□□□□ -2.04
MRPS28	P21771	ECM18	YDR125C	1362 nt		2.31	□□□□□ -2.04
MRPS28	P21771	SGS1	YMR190C	4344 nt		2.31	□□□□□ -2.04
MRPS28	P21771	RED1	YLR263W	2484 nt		2.31	□□□□□ -2.04
MRPS28	P21771	SCD5	YOR329C	2619 nt		2.31	□□□□□ -2.04
MRPS28	P21771	NOP14	YDL148C	2433 nt		2.3	□□□□□ -2.04
MRPS28	P21771	IRA2	YOL081W	9240 nt		2.3	□□□□□ -2.04
MRPS28	P21771	AI2	Q0055	2565 nt		2.3	□□□□□ -2.04
MRPS28	P21771	NHP10	YDL002C	612 nt		2.3	□□□□□ -2.04
MRPS28	P21771	TIF35	YDR429C	825 nt		2.3	□□□□□ -2.04
MRPS28	P21771	ISC10	YER180C	804 nt		2.3	□□□□□ -2.04
MRPS28	P21771	POP6	YGR030C	477 nt		2.3	□□□□□ -2.04
MRPS28	P21771	YHL045W	YHL045W	348 nt		2.3	□□□□□ -2.04
MRPS28	P21771	YHR097C	YHR097C	1101 nt		2.3	□□□□□ -2.04
MRPS28	P21771	DAD2	YKR083C	402 nt		2.3	□□□□□ -2.04
MRPS28	P21771	YLR076C	YLR076C	423 nt		2.3	□□□□□ -2.04
MRPS28	P21771	RDN58-1	RDN58-1	158 nt		2.3	□□□□□ -2.04
MRPS28	P21771	RDN58-2	RDN58-2	158 nt		2.3	□□□□□ -2.04
MRPS28	P21771	YOL024W	YOL024W	519 nt		2.3	□□□□□ -2.04
MRPS28	P21771	snR11	snR11	258 nt		2.3	□□□□□ -2.04
MRPS28	P21771	YKL100C	YKL100C	1764 nt		2.3	□□□□□ -2.04

Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms