Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 AC080038.3-201ENST00000623346 1952 ntBASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 AC079630.1-202ENST00000618127 1840 ntBASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 HCG11-201ENST00000411553 5696 ntBASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-6A0A0B4J262 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-6A0A0B4J262 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 FP325331.1-202ENST00000623531 1380 ntBASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 MIR3621-201ENST00000580529 85 ntBASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
TRAV8-6A0A0B4J262 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 AC009102.2-201ENST00000606772 1639 ntBASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 AC144652.1-201ENST00000609974 1624 ntBASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms