Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 MIR3181-201ENST00000578512 73 ntBASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.42■□□□□ 0.54
FOXJ3Q9UPW0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 AC131281.2-201ENST00000520478 145 ntBASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
FOXJ3Q9UPW0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
FOXJ3Q9UPW0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
FOXJ3Q9UPW0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
FOXJ3Q9UPW0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
FOXJ3Q9UPW0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 AC092171.4-201ENST00000609130 632 ntBASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
FOXJ3Q9UPW0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 AL136116.3-201ENST00000402907 1138 ntBASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
FOXJ3Q9UPW0 AC003102.1-202ENST00000563394 1796 ntBASIC18.37■□□□□ 0.53
FOXJ3Q9UPW0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
FOXJ3Q9UPW0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms