Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSPG4P5Q96PW8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
CSPG4P5Q96PW8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.83■■□□□ 1.09
CSPG4P5Q96PW8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSPG4P5Q96PW8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSPG4P5Q96PW8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSPG4P5Q96PW8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSPG4P5Q96PW8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.83■■□□□ 1.09
CSPG4P5Q96PW8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.83■■□□□ 1.09
CSPG4P5Q96PW8 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.83■■□□□ 1.09
CSPG4P5Q96PW8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CSPG4P5Q96PW8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.83■■□□□ 1.08
CSPG4P5Q96PW8 LINC02228-203ENST00000641970 1355 ntBASIC21.83■■□□□ 1.08
CSPG4P5Q96PW8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.83■■□□□ 1.08
CSPG4P5Q96PW8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CSPG4P5Q96PW8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 AC005229.4-201ENST00000610085 2198 ntBASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 AL024507.2-201ENST00000606070 2574 ntBASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 AC123595.1-201ENST00000440769 1046 ntBASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 YBX1P1-201ENST00000445822 960 ntBASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 AF106564.1-201ENST00000607058 2553 ntBASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSPG4P5Q96PW8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 EEF1DP3-203ENST00000566025 782 ntBASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
CSPG4P5Q96PW8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 AC079140.4-201ENST00000507448 529 ntBASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSPG4P5Q96PW8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSPG4P5Q96PW8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 TERF1P2-201ENST00000583350 1212 ntBASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 AC053503.5-201ENST00000601508 636 ntBASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CSPG4P5Q96PW8 KRT87P-202ENST00000534226 1464 ntBASIC21.77■■□□□ 1.08
CSPG4P5Q96PW8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms