Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 AVT7YIL088C 1473 nt5.06□□□□□ -1.6
TY1A-MR1Q04215 UTP9YHR196W 1728 nt5.06□□□□□ -1.6
TY1A-MR1Q04215 PUB1YNL016W 1362 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 CBP2YHL038C 1893 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 SNZ3YFL059W 897 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 PAI3YMR174C 207 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 HOR7YMR251W-A 180 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 YNL285WYNL285W 372 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 SNZ2YNL333W 897 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 YOR011W-AYOR011W-A 207 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 VPS69YPR087W 321 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 NCS2YNL119W 1482 nt5.05□□□□□ -1.6
TY1A-MR1Q04215 VTC2YFL004W 2487 nt5.04□□□□□ -1.6
TY1A-MR1Q04215 CST6YIL036W 1764 nt5.04□□□□□ -1.6
TY1A-MR1Q04215 STE7YDL159W 1548 nt5.04□□□□□ -1.6
TY1A-MR1Q04215 YCR097W-AYCR097W-A 267 nt5.04□□□□□ -1.6
TY1A-MR1Q04215 DFM1YDR411C 1026 nt5.04□□□□□ -1.6
TY1A-MR1Q04215 SPG4YMR107W 348 nt5.04□□□□□ -1.6
TY1A-MR1Q04215 FSH3YOR280C 801 nt5.04□□□□□ -1.6
TY1A-MR1Q04215 MRPS5YBR251W 924 nt5.04□□□□□ -1.6
TY1A-MR1Q04215 NDD1YOR372C 1665 nt5.04□□□□□ -1.6
TY1A-MR1Q04215 MSM1YGR171C 1728 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 VHR2YER064C 1518 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 YIR007WYIR007W 2295 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 MTL1YGR023W 1656 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 TRE1YPL176C 2352 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 YDR053WYDR053W 396 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 ATO3YDR384C 828 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 COX4YGL187C 468 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 YHR218W-AYHR218W-A 318 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 YIL060WYIL060W 435 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 YBL112CYBL112C 318 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 BIL1YOR304C-A 231 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 UTP4YDR324C 2331 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 IRC10YOL015W 1761 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 SEC59YMR013C 1560 nt5.03□□□□□ -1.6
TY1A-MR1Q04215 TRS65YGR166W 1683 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 OSW2YLR054C 2175 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 VPS1YKR001C 2115 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 NTF2YER009W 378 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 YHR213W-AYHR213W-A 234 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 YLR157W-EYLR157W-E 165 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 YMR316C-AYMR316C-A 312 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 FEX1YOR390W 1128 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 SPE1YKL184W 1401 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 TEF1YPR080W 1377 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 TEF2YBR118W 1377 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 PPQ1YPL179W 1650 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 ARB1YER036C 1833 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 AAP1YHR047C 2571 nt5.02□□□□□ -1.61
TY1A-MR1Q04215 YBP2YGL060W 1926 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 SIA1YOR137C 1869 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 ACC1YNR016C 6702 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 AMD1YML035C 2433 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 YGR117CYGR117C 1431 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 YCR007CYCR007C 720 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 RPS14AYCR031C 414 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 PRP11YDL043C 801 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 YDL068WYDL068W 330 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 HYR1YIR037W 492 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 RMP1YLR145W 606 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 YLR296WYLR296W 327 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 PGA3YML125C 939 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 ZEO1YOL109W 342 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 ERI1YPL096C-A 207 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 SIS2YKR072C 1689 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 MNN2YBR015C 1794 nt5.01□□□□□ -1.61
TY1A-MR1Q04215 CUE3YGL110C 1875 nt5□□□□□ -1.61
TY1A-MR1Q04215 HPF1YOL155C 2904 nt5□□□□□ -1.61
TY1A-MR1Q04215 YEL077CYEL077C 3834 nt5□□□□□ -1.61
TY1A-MR1Q04215 YHR045WYHR045W 1683 nt5□□□□□ -1.61
TY1A-MR1Q04215 PDC1YLR044C 1692 nt5□□□□□ -1.61
TY1A-MR1Q04215 AHC2YCR082W 387 nt5□□□□□ -1.61
TY1A-MR1Q04215 COA4YLR218C 453 nt5□□□□□ -1.61
TY1A-MR1Q04215 QCR2YPR191W 1107 nt5□□□□□ -1.61
TY1A-MR1Q04215 YMR221CYMR221C 1515 nt5□□□□□ -1.61
TY1A-MR1Q04215 YEH2YLR020C 1617 nt5□□□□□ -1.61
TY1A-MR1Q04215 LAP3YNL239W 1365 nt5□□□□□ -1.61
TY1A-MR1Q04215 HOM3YER052C 1584 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 RIM4YHL024W 2142 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 YDR090CYDR090C 933 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 YHL018WYHL018W 363 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 PKR1YMR123W 369 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 MRPL51YPR100W 423 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 snR51snR51 107 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 RVB1YDR190C 1392 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 ABZ1YNR033W 2364 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 FUS2YMR232W 2034 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 HXT5YHR096C 1779 nt4.99□□□□□ -1.61
TY1A-MR1Q04215 CDC6YJL194W 1542 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 SEC2YNL272C 2280 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 OXP1YKL215C 3861 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 GIP1YBR045C 1920 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 GOS1YHL031C 672 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 HIS5YIL116W 1158 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 RPS5YJR123W 678 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 CIN4YMR138W 576 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 YAR1YPL239W 603 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 YBR085C-AYBR085C-A 258 nt4.98□□□□□ -1.61
TY1A-MR1Q04215 YME1YPR024W 2244 nt4.98□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 44.2 ms