Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 VPS33YLR396C 2076 nt4.67□□□□□ -1.66
PUF4P25339 YBP2YGL060W 1926 nt4.67□□□□□ -1.66
PUF4P25339 YJL049WYJL049W 1353 nt4.66□□□□□ -1.66
PUF4P25339 DSN1YIR010W 1731 nt4.66□□□□□ -1.66
PUF4P25339 ARP5YNL059C 2268 nt4.66□□□□□ -1.66
PUF4P25339 PHO84YML123C 1764 nt4.66□□□□□ -1.66
PUF4P25339 YDR320W-BYDR320W-B 138 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)CtK(CUU)C 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)D1tK(CUU)D1 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)D2tK(CUU)D2 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)E1tK(CUU)E1 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)E2tK(CUU)E2 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)FtK(CUU)F 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)G1tK(CUU)G1 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)G2tK(CUU)G2 73 nt4.66□□□□□ -1.66
PUF4P25339 SLX8YER116C 825 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)G3tK(CUU)G3 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)ItK(CUU)I 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)JtK(CUU)J 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)KtK(CUU)K 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)MtK(CUU)M 73 nt4.66□□□□□ -1.66
PUF4P25339 tK(CUU)PtK(CUU)P 73 nt4.66□□□□□ -1.66
PUF4P25339 HUR1YGL168W 333 nt4.66□□□□□ -1.66
PUF4P25339 SOP4YJL192C 705 nt4.66□□□□□ -1.66
PUF4P25339 PIR3YKL163W 978 nt4.66□□□□□ -1.66 RIP-Chip
PUF4P25339 RDN58-1RDN58-1 158 nt4.66□□□□□ -1.66
PUF4P25339 RDN58-2RDN58-2 158 nt4.66□□□□□ -1.66
PUF4P25339 PHO80YOL001W 882 nt4.66□□□□□ -1.66
PUF4P25339 RPS19AYOL121C 435 nt4.66□□□□□ -1.66
PUF4P25339 SUS1YBR111W-A 291 nt4.66□□□□□ -1.66
PUF4P25339 SAT4YCR008W 1812 nt4.66□□□□□ -1.66
PUF4P25339 RRN11YML043C 1524 nt4.66□□□□□ -1.66
PUF4P25339 DBP3YGL078C 1572 nt4.65□□□□□ -1.66 RIP-Chip
PUF4P25339 GAD1YMR250W 1758 nt4.65□□□□□ -1.66 RIP-Chip
PUF4P25339 APC1YNL172W 5247 nt4.65□□□□□ -1.66
PUF4P25339 AFR1YDR085C 1863 nt4.65□□□□□ -1.66
PUF4P25339 ATG31YDR022C 591 nt4.65□□□□□ -1.67
PUF4P25339 HOM2YDR158W 1098 nt4.65□□□□□ -1.67
PUF4P25339 VAB2YEL005C 849 nt4.65□□□□□ -1.67
PUF4P25339 YER079WYER079W 633 nt4.65□□□□□ -1.67
PUF4P25339 SEC4YFL005W 648 nt4.65□□□□□ -1.67
PUF4P25339 YIL021C-AYIL021C-A 270 nt4.65□□□□□ -1.67
PUF4P25339 RSM25YIL093C 795 nt4.65□□□□□ -1.67
PUF4P25339 TPM2YIL138C 486 nt4.65□□□□□ -1.67
PUF4P25339 YJL119CYJL119C 324 nt4.65□□□□□ -1.67
PUF4P25339 LSO1YJR005C-A 282 nt4.65□□□□□ -1.67
PUF4P25339 YJR038CYJR038C 363 nt4.65□□□□□ -1.67
PUF4P25339 NNF1YJR112W 606 nt4.65□□□□□ -1.67
PUF4P25339 YNK1YKL067W 462 nt4.65□□□□□ -1.67
PUF4P25339 YMR158W-BYMR158W-B 321 nt4.65□□□□□ -1.67
PUF4P25339 DYN3YMR299C 939 nt4.65□□□□□ -1.67
PUF4P25339 YPL088WYPL088W 1029 nt4.65□□□□□ -1.67
PUF4P25339 snR17asnR17a 333 nt4.65□□□□□ -1.67
PUF4P25339 MRPL40YPL173W 894 nt4.65□□□□□ -1.67
PUF4P25339 NUP2YLR335W 2163 nt4.65□□□□□ -1.67
PUF4P25339 ANR2YKL047W 1551 nt4.65□□□□□ -1.67
PUF4P25339 MET4YNL103W 2019 nt4.65□□□□□ -1.67
PUF4P25339 VBA2YBR293W 1425 nt4.64□□□□□ -1.67
PUF4P25339 YDR269CYDR269C 324 nt4.64□□□□□ -1.67
PUF4P25339 LSB1YGR136W 726 nt4.64□□□□□ -1.67
PUF4P25339 RPL8AYHL033C 771 nt4.64□□□□□ -1.67
PUF4P25339 tS(AGA)D3tS(AGA)D3 83 nt4.64□□□□□ -1.67
PUF4P25339 YHR130CYHR130C 336 nt4.64□□□□□ -1.67
PUF4P25339 YIR036W-AYIR036W-A 402 nt4.64□□□□□ -1.67
PUF4P25339 YET1YKL065C 621 nt4.64□□□□□ -1.67
PUF4P25339 KTR2YKR061W 1278 nt4.64□□□□□ -1.67 RIP-Chip
PUF4P25339 BET3YKR068C 582 nt4.64□□□□□ -1.67
PUF4P25339 ATP18YML081C-A 180 nt4.64□□□□□ -1.67
PUF4P25339 YMR087WYMR087W 855 nt4.64□□□□□ -1.67 RIP-Chip
PUF4P25339 YOR186WYOR186W 435 nt4.64□□□□□ -1.67
PUF4P25339 YPL185WYPL185W 396 nt4.64□□□□□ -1.67
PUF4P25339 APD1YBR151W 951 nt4.64□□□□□ -1.67
PUF4P25339 SEC66YBR171W 621 nt4.64□□□□□ -1.67
PUF4P25339 YBR242WYBR242W 717 nt4.64□□□□□ -1.67
PUF4P25339 AZR1YGR224W 1842 nt4.64□□□□□ -1.67
PUF4P25339 ROK1YGL171W 1695 nt4.64□□□□□ -1.67
PUF4P25339 YDR261C-DYDR261C-D 4815 nt4.63□□□□□ -1.67
PUF4P25339 SNU56YDR240C 1479 nt4.63□□□□□ -1.67
PUF4P25339 NEL1YHR035W 1893 nt4.63□□□□□ -1.67
PUF4P25339 YHR138CYHR138C 345 nt4.63□□□□□ -1.67
PUF4P25339 SDL1YIL167W 633 nt4.63□□□□□ -1.67
PUF4P25339 BER1YLR412W 825 nt4.63□□□□□ -1.67
PUF4P25339 BET5YML077W 480 nt4.63□□□□□ -1.67
PUF4P25339 YNL181WYNL181W 1224 nt4.63□□□□□ -1.67
PUF4P25339 snR41snR41 95 nt4.63□□□□□ -1.67
PUF4P25339 OM14YBR230C 405 nt4.63□□□□□ -1.67
PUF4P25339 TSR1YDL060W 2367 nt4.63□□□□□ -1.67 RIP-Chip
PUF4P25339 GYP6YJL044C 1377 nt4.63□□□□□ -1.67
PUF4P25339 EGT2YNL327W 3126 nt4.62□□□□□ -1.67
PUF4P25339 PER1YCR044C 1074 nt4.62□□□□□ -1.67
PUF4P25339 YDR366CYDR366C 399 nt4.62□□□□□ -1.67
PUF4P25339 PRM8YGL053W 714 nt4.62□□□□□ -1.67
PUF4P25339 RPL9AYGL147C 576 nt4.62□□□□□ -1.67 RIP-Chip
PUF4P25339 ACF4YJR083C 930 nt4.62□□□□□ -1.67
PUF4P25339 YNR034W-AYNR034W-A 297 nt4.62□□□□□ -1.67
PUF4P25339 CIN5YOR028C 888 nt4.62□□□□□ -1.67
PUF4P25339 GPX2YBR244W 489 nt4.62□□□□□ -1.67
PUF4P25339 YLR152CYLR152C 1731 nt4.62□□□□□ -1.67
PUF4P25339 PRP3YDR473C 1410 nt4.62□□□□□ -1.67
PUF4P25339 YER175W-AYER175W-A 165 nt4.61□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms