Protein–RNA interactions for Protein: P21771

MRPS28, 37S ribosomal protein S28, mitochondrial, yeast

Predictions only

Length 286 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	P21771	DUN1	YDL101C	1542 nt		2.54	□□□□□ -2
MRPS28	P21771	YGL101W	YGL101W	648 nt		2.54	□□□□□ -2
MRPS28	P21771	YGR204C-A	YGR204C-A	114 nt		2.54	□□□□□ -2
MRPS28	P21771	MED11	YMR112C	396 nt		2.54	□□□□□ -2
MRPS28	P21771	HUB1	YNR032C-A	222 nt		2.54	□□□□□ -2
MRPS28	P21771	RFM1	YOR279C	933 nt		2.54	□□□□□ -2
MRPS28	P21771	YPR136C	YPR136C	513 nt		2.54	□□□□□ -2
MRPS28	P21771	RIM13	YMR154C	2184 nt		2.54	□□□□□ -2
MRPS28	P21771	HRD1	YOL013C	1656 nt		2.53	□□□□□ -2
MRPS28	P21771	SPP382	YLR424W	2127 nt		2.53	□□□□□ -2
MRPS28	P21771	NSE3	YDR288W	912 nt		2.53	□□□□□ -2
MRPS28	P21771	MCM21	YDR318W	1107 nt		2.53	□□□□□ -2
MRPS28	P21771	PEX4	YGR133W	552 nt		2.53	□□□□□ -2
MRPS28	P21771	ENV10	YLR065C	546 nt		2.53	□□□□□ -2
MRPS28	P21771	YAR075W	YAR075W	474 nt		2.53	□□□□□ -2
MRPS28	P21771	RAD10	YML095C	633 nt		2.53	□□□□□ -2
MRPS28	P21771	HNT3	YOR258W	654 nt		2.53	□□□□□ -2
MRPS28	P21771	HMT1	YBR034C	1047 nt		2.53	□□□□□ -2
MRPS28	P21771	SIR3	YLR442C	2937 nt		2.52	□□□□□ -2.01
MRPS28	P21771	EBS1	YDR206W	2655 nt		2.52	□□□□□ -2.01
MRPS28	P21771	SLP1	YOR154W	1764 nt		2.52	□□□□□ -2.01
MRPS28	P21771	DUO1	YGL061C	744 nt		2.52	□□□□□ -2.01
MRPS28	P21771	RPL17B	YJL177W	555 nt		2.52	□□□□□ -2.01
MRPS28	P21771	YKR011C	YKR011C	1062 nt		2.52	□□□□□ -2.01
MRPS28	P21771	YPR053C	YPR053C	456 nt		2.52	□□□□□ -2.01
MRPS28	P21771	VMA9	YCL005W-A	222 nt		2.52	□□□□□ -2.01
MRPS28	P21771	SWR1	YDR334W	4545 nt		2.52	□□□□□ -2.01
MRPS28	P21771	FAR11	YNL127W	2862 nt		2.51	□□□□□ -2.01
MRPS28	P21771	VPS3	YDR495C	3036 nt		2.51	□□□□□ -2.01
MRPS28	P21771	TPS2	YDR074W	2691 nt		2.51	□□□□□ -2.01
MRPS28	P21771	PST1	YDR055W	1335 nt		2.51	□□□□□ -2.01
MRPS28	P21771	TRA1	YHR099W	11235 nt		2.51	□□□□□ -2.01
MRPS28	P21771	NET1	YJL076W	3570 nt		2.51	□□□□□ -2.01
MRPS28	P21771	EXO84	YBR102C	2262 nt		2.51	□□□□□ -2.01
MRPS28	P21771	PPH3	YDR075W	927 nt		2.51	□□□□□ -2.01
MRPS28	P21771	CGR1	YGL029W	363 nt		2.51	□□□□□ -2.01
MRPS28	P21771	YGR121W-A	YGR121W-A	216 nt		2.51	□□□□□ -2.01
MRPS28	P21771	YLR012C	YLR012C	300 nt		2.51	□□□□□ -2.01
MRPS28	P21771	NIT3	YLR351C	876 nt		2.51	□□□□□ -2.01
MRPS28	P21771	YMR316C-A	YMR316C-A	312 nt		2.51	□□□□□ -2.01
MRPS28	P21771	PFK27	YOL136C	1194 nt		2.51	□□□□□ -2.01
MRPS28	P21771	ARF3	YOR094W	552 nt		2.51	□□□□□ -2.01
MRPS28	P21771	YPR027C	YPR027C	834 nt		2.51	□□□□□ -2.01
MRPS28	P21771	TIM12	YBR091C	330 nt		2.51	□□□□□ -2.01
MRPS28	P21771	RPN4	YDL020C	1596 nt		2.51	□□□□□ -2.01
MRPS28	P21771	ACA1	YER045C	1470 nt		2.51	□□□□□ -2.01
MRPS28	P21771	HAP4	YKL109W	1665 nt		2.5	□□□□□ -2.01
MRPS28	P21771	SEC59	YMR013C	1560 nt		2.5	□□□□□ -2.01
MRPS28	P21771	ERP3	YDL018C	678 nt		2.5	□□□□□ -2.01
MRPS28	P21771	SPT2	YER161C	1002 nt		2.5	□□□□□ -2.01
MRPS28	P21771	YGR026W	YGR026W	837 nt		2.5	□□□□□ -2.01
MRPS28	P21771	CAB2	YIL083C	1098 nt		2.5	□□□□□ -2.01
MRPS28	P21771	NDL1	YLR254C	570 nt		2.5	□□□□□ -2.01
MRPS28	P21771	HAT1	YPL001W	1125 nt		2.5	□□□□□ -2.01
MRPS28	P21771	YDR034C-D	YDR034C-D	5313 nt		2.5	□□□□□ -2.01
MRPS28	P21771	YDR210W-B	YDR210W-B	5313 nt		2.5	□□□□□ -2.01
MRPS28	P21771	YLR410W-B	YLR410W-B	5313 nt		2.5	□□□□□ -2.01
MRPS28	P21771	SAK1	YER129W	3429 nt		2.5	□□□□□ -2.01
MRPS28	P21771	VPS30	YPL120W	1674 nt		2.5	□□□□□ -2.01
MRPS28	P21771	CIN1	YOR349W	3045 nt		2.5	□□□□□ -2.01
MRPS28	P21771	YEF3	YLR249W	3135 nt		2.49	□□□□□ -2.01
MRPS28	P21771	CIK1	YMR198W	1785 nt		2.49	□□□□□ -2.01
MRPS28	P21771	snR63	snR63	255 nt		2.49	□□□□□ -2.01
MRPS28	P21771	YGR107W	YGR107W	450 nt		2.49	□□□□□ -2.01
MRPS28	P21771	YAL069W	YAL069W	315 nt		2.49	□□□□□ -2.01
MRPS28	P21771	SPC24	YMR117C	642 nt		2.49	□□□□□ -2.01
MRPS28	P21771	YOR055W	YOR055W	435 nt		2.49	□□□□□ -2.01
MRPS28	P21771	CAT5	YOR125C	702 nt		2.49	□□□□□ -2.01
MRPS28	P21771	TOF1	YNL273W	3717 nt		2.48	□□□□□ -2.01
MRPS28	P21771	PSK1	YAL017W	4071 nt		2.48	□□□□□ -2.01
MRPS28	P21771	HRT3	YLR097C	1035 nt		2.48	□□□□□ -2.01
MRPS28	P21771	REX3	YLR107W	1215 nt		2.48	□□□□□ -2.01
MRPS28	P21771	SAM37	YMR060C	984 nt		2.48	□□□□□ -2.01
MRPS28	P21771	MRPS17	YMR188C	714 nt		2.48	□□□□□ -2.01
MRPS28	P21771	AAR2	YBL074C	1068 nt		2.48	□□□□□ -2.01
MRPS28	P21771	INO4	YOL108C	456 nt		2.48	□□□□□ -2.01
MRPS28	P21771	YOR263C	YOR263C	408 nt		2.48	□□□□□ -2.01
MRPS28	P21771	IRC8	YJL051W	2469 nt		2.48	□□□□□ -2.01
MRPS28	P21771	IKI3	YLR384C	4050 nt		2.47	□□□□□ -2.01
MRPS28	P21771	SIN4	YNL236W	2925 nt		2.47	□□□□□ -2.01
MRPS28	P21771	YLR339C	YLR339C	552 nt		2.47	□□□□□ -2.01
MRPS28	P21771	SLI1	YGR212W	1407 nt		2.47	□□□□□ -2.01
MRPS28	P21771	AYT1	YLL063C	1425 nt		2.47	□□□□□ -2.01
MRPS28	P21771	HAA1	YPR008W	2085 nt		2.46	□□□□□ -2.01
MRPS28	P21771	TAF2	YCR042C	4224 nt		2.46	□□□□□ -2.02
MRPS28	P21771	RPL27B	YDR471W	411 nt		2.46	□□□□□ -2.02
MRPS28	P21771	SMT3	YDR510W	306 nt		2.46	□□□□□ -2.02
MRPS28	P21771	SDO1	YLR022C	753 nt		2.46	□□□□□ -2.02
MRPS28	P21771	RPL15A	YLR029C	615 nt		2.46	□□□□□ -2.02
MRPS28	P21771	YJL181W	YJL181W	1836 nt		2.46	□□□□□ -2.02
MRPS28	P21771	PHO2	YDL106C	1680 nt		2.46	□□□□□ -2.02
MRPS28	P21771	RIX1	YHR197W	2292 nt		2.45	□□□□□ -2.02
MRPS28	P21771	GEA1	YJR031C	4227 nt		2.45	□□□□□ -2.02
MRPS28	P21771	TCB2	YNL087W	3537 nt		2.45	□□□□□ -2.02
MRPS28	P21771	AEP3	YPL005W	1821 nt		2.45	□□□□□ -2.02
MRPS28	P21771	PDR1	YGL013C	3207 nt		2.45	□□□□□ -2.02
MRPS28	P21771	MTL1	YGR023W	1656 nt		2.45	□□□□□ -2.02
MRPS28	P21771	BSC2	YDR275W	708 nt		2.45	□□□□□ -2.02
MRPS28	P21771	YDR340W	YDR340W	303 nt		2.45	□□□□□ -2.02
MRPS28	P21771	GRX2	YDR513W	432 nt		2.45	□□□□□ -2.02

Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms