Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01549A6NIU2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LINC01549A6NIU2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01549A6NIU2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC01549A6NIU2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01549A6NIU2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15□□□□□ -0.01
LINC01549A6NIU2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
LINC01549A6NIU2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01549A6NIU2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01549A6NIU2 AC079089.2-201ENST00000531211 1277 ntBASIC15□□□□□ -0.01
LINC01549A6NIU2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15□□□□□ -0.01
LINC01549A6NIU2 MIR7108-201ENST00000614319 87 ntBASIC15□□□□□ -0.01
LINC01549A6NIU2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15□□□□□ -0.01
LINC01549A6NIU2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15□□□□□ -0.01
LINC01549A6NIU2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15□□□□□ -0.01
LINC01549A6NIU2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15□□□□□ -0.01
LINC01549A6NIU2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
LINC01549A6NIU2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01549A6NIU2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15□□□□□ -0.01
LINC01549A6NIU2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LINC01549A6NIU2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LINC01549A6NIU2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 SNX5-217ENST00000606557 1087 ntBASIC14.99□□□□□ -0.01
LINC01549A6NIU2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01549A6NIU2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 RNF126P1-201ENST00000567452 1320 ntBASIC14.98□□□□□ -0.01
LINC01549A6NIU2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 AC139795.1-202ENST00000500444 432 ntBASIC14.98□□□□□ -0.01
LINC01549A6NIU2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01549A6NIU2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 AP005212.1-201ENST00000581547 1997 ntBASIC14.97□□□□□ -0.01
LINC01549A6NIU2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01549A6NIU2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms