Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 LETM1P2-201ENST00000597330 2178 ntBASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV8-6A0A0B4J262 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV8-6A0A0B4J262 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV8-6A0A0B4J262 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-6A0A0B4J262 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-6A0A0B4J262 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-6A0A0B4J262 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 AIRN-201ENST00000601203 4374 ntBASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 AL117332.1-201ENST00000622628 974 ntBASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-6A0A0B4J262 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-6A0A0B4J262 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 824.9 ms