Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM56-RWDD3S4R434 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM56-RWDD3S4R434 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 AL034346.1-201ENST00000568244 1277 ntBASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM56-RWDD3S4R434 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 AC087239.1-201ENST00000622671 572 ntBASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM56-RWDD3S4R434 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 AC003102.1-202ENST00000563394 1796 ntBASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 pRNA.6-201ENST00000610482 90 ntBASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 pRNA.5-201ENST00000612139 90 ntBASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 pRNA.11-201ENST00000618423 90 ntBASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 pRNA.13-201ENST00000619112 90 ntBASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 AP005212.1-201ENST00000581547 1997 ntBASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM56-RWDD3S4R434 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 MIR4787-201ENST00000607364 84 ntBASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM56-RWDD3S4R434 AC006128.1-201ENST00000624704 1661 ntBASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 AC010141.3-201ENST00000456659 717 ntBASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM56-RWDD3S4R434 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms