Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD4Q9H0A8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 KRT16P3-201ENST00000439127 1283 ntBASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 AL035685.1-201ENST00000636663 812 ntBASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.66■□□□□ 0.58
COMMD4Q9H0A8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 AC092171.4-201ENST00000609130 632 ntBASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 AC073130.3-201ENST00000624389 2278 ntBASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.65■□□□□ 0.58
COMMD4Q9H0A8 LINC01521-201ENST00000504184 1943 ntBASIC18.64■□□□□ 0.58
COMMD4Q9H0A8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 AL356740.2-201ENST00000601559 647 ntBASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COMMD4Q9H0A8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 MIR3181-201ENST00000578512 73 ntBASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD4Q9H0A8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD4Q9H0A8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms