Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KRT78Q8N1N4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT78Q8N1N4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.46■□□□□ 0.87
KRT78Q8N1N4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.46■□□□□ 0.87
KRT78Q8N1N4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
KRT78Q8N1N4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT78Q8N1N4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KRT78Q8N1N4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KRT78Q8N1N4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 AC055733.4-201ENST00000638462 1354 ntBASIC20.45■□□□□ 0.86
KRT78Q8N1N4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.45■□□□□ 0.86
KRT78Q8N1N4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 MIR6084-201ENST00000622012 110 ntBASIC20.44■□□□□ 0.86
KRT78Q8N1N4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KRT78Q8N1N4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.43■□□□□ 0.86
KRT78Q8N1N4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT78Q8N1N4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 AC027612.3-201ENST00000413684 1047 ntBASIC20.41■□□□□ 0.86
KRT78Q8N1N4 TPRG1LP1-201ENST00000598702 760 ntBASIC20.41■□□□□ 0.86
KRT78Q8N1N4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT78Q8N1N4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.4■□□□□ 0.86
KRT78Q8N1N4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT78Q8N1N4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT78Q8N1N4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT78Q8N1N4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.39■□□□□ 0.86
KRT78Q8N1N4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT78Q8N1N4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT78Q8N1N4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT78Q8N1N4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms