Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFTPBP07988 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFTPBP07988 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.34■□□□□ 0.53
SFTPBP07988 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFTPBP07988 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFTPBP07988 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
SFTPBP07988 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
SFTPBP07988 AC136469.2-201ENST00000623944 1028 ntBASIC18.34■□□□□ 0.53
SFTPBP07988 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.34■□□□□ 0.53
SFTPBP07988 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SFTPBP07988 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SFTPBP07988 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SFTPBP07988 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SFTPBP07988 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SFTPBP07988 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SFTPBP07988 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SFTPBP07988 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SFTPBP07988 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SFTPBP07988 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SFTPBP07988 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.33■□□□□ 0.52
SFTPBP07988 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SFTPBP07988 MIR939-201ENST00000401314 82 ntBASIC18.33■□□□□ 0.52
SFTPBP07988 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.33■□□□□ 0.52
SFTPBP07988 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SFTPBP07988 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.33■□□□□ 0.52
SFTPBP07988 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.33■□□□□ 0.52
SFTPBP07988 AL136967.2-201ENST00000623968 743 ntBASIC18.33■□□□□ 0.52
SFTPBP07988 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SFTPBP07988 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.33■□□□□ 0.52
SFTPBP07988 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.33■□□□□ 0.52
SFTPBP07988 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.33■□□□□ 0.52
SFTPBP07988 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SFTPBP07988 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SFTPBP07988 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.33■□□□□ 0.52
SFTPBP07988 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SFTPBP07988 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SFTPBP07988 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.32■□□□□ 0.52
SFTPBP07988 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.32■□□□□ 0.52
SFTPBP07988 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.32■□□□□ 0.52
SFTPBP07988 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.32■□□□□ 0.52
SFTPBP07988 AC010525.1-201ENST00000585559 441 ntBASIC18.32■□□□□ 0.52
SFTPBP07988 AC068587.7-201ENST00000641602 218 ntBASIC18.32■□□□□ 0.52
SFTPBP07988 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.32■□□□□ 0.52
SFTPBP07988 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SFTPBP07988 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SFTPBP07988 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SFTPBP07988 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.31■□□□□ 0.52
SFTPBP07988 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.31■□□□□ 0.52
SFTPBP07988 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 ZNRF2P3-201ENST00000424200 374 ntBASIC18.31■□□□□ 0.52
SFTPBP07988 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.31■□□□□ 0.52
SFTPBP07988 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.31■□□□□ 0.52
SFTPBP07988 AC008764.7-201ENST00000593779 1081 ntBASIC18.31■□□□□ 0.52
SFTPBP07988 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.31■□□□□ 0.52
SFTPBP07988 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SFTPBP07988 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SFTPBP07988 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SFTPBP07988 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.3■□□□□ 0.52
SFTPBP07988 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.3■□□□□ 0.52
SFTPBP07988 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SFTPBP07988 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.3■□□□□ 0.52
SFTPBP07988 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.3■□□□□ 0.52
SFTPBP07988 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SFTPBP07988 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 AC244015.2-201ENST00000616358 1861 ntBASIC18.3■□□□□ 0.52
SFTPBP07988 OR7E47P-201ENST00000546390 1422 ntBASIC18.3■□□□□ 0.52
SFTPBP07988 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SFTPBP07988 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.3■□□□□ 0.52
SFTPBP07988 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SFTPBP07988 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms