Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHB5Q9Y5E4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDHB5Q9Y5E4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHB5Q9Y5E4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.45■■□□□ 1.19
PCDHB5Q9Y5E4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHB5Q9Y5E4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 AC006970.2-201ENST00000450065 779 ntBASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 DUX4L16-201ENST00000555130 1264 ntBASIC22.44■■□□□ 1.18
PCDHB5Q9Y5E4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 CROCCP5-201ENST00000436658 830 ntBASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 AC008175.2-201ENST00000612840 297 ntBASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 AC231657.2-201ENST00000624556 255 ntBASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHB5Q9Y5E4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 SLC7A5P1-201ENST00000568957 537 ntBASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 AC003102.1-202ENST00000563394 1796 ntBASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHB5Q9Y5E4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 SLC7A5P2-201ENST00000553010 536 ntBASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHB5Q9Y5E4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 MIR663A-201ENST00000385250 93 ntBASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 HLA-L-209ENST00000420110 1011 ntBASIC22.4■■□□□ 1.18
PCDHB5Q9Y5E4 AC007322.1-201ENST00000426983 750 ntBASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms