Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 CYP2T1P-201ENST00000432607 1285 ntBASIC24.79■■□□□ 1.56
EFCC1Q9HA90 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 KRT18P20-201ENST00000548986 1279 ntBASIC24.79■■□□□ 1.56
EFCC1Q9HA90 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
EFCC1Q9HA90 AC055733.4-201ENST00000638462 1354 ntBASIC24.79■■□□□ 1.56
EFCC1Q9HA90 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.78■■□□□ 1.56
EFCC1Q9HA90 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.78■■□□□ 1.56
EFCC1Q9HA90 AC068473.5-201ENST00000616428 2072 ntBASIC24.78■■□□□ 1.56
EFCC1Q9HA90 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
EFCC1Q9HA90 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
EFCC1Q9HA90 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
EFCC1Q9HA90 AC006058.3-201ENST00000606217 1069 ntBASIC24.78■■□□□ 1.56
EFCC1Q9HA90 AL024507.2-201ENST00000606070 2574 ntBASIC24.78■■□□□ 1.56
EFCC1Q9HA90 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
EFCC1Q9HA90 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
EFCC1Q9HA90 AC068338.2-201ENST00000563278 1430 ntBASIC24.78■■□□□ 1.56
EFCC1Q9HA90 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
EFCC1Q9HA90 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
EFCC1Q9HA90 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.77■■□□□ 1.56
EFCC1Q9HA90 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.77■■□□□ 1.56
EFCC1Q9HA90 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
EFCC1Q9HA90 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
EFCC1Q9HA90 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
EFCC1Q9HA90 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
EFCC1Q9HA90 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
EFCC1Q9HA90 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.76■■□□□ 1.55
EFCC1Q9HA90 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
EFCC1Q9HA90 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC24.76■■□□□ 1.55
EFCC1Q9HA90 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
EFCC1Q9HA90 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.76■■□□□ 1.55
EFCC1Q9HA90 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 AC010141.2-201ENST00000452426 721 ntBASIC24.75■■□□□ 1.55
EFCC1Q9HA90 AC128676.1-201ENST00000454392 318 ntBASIC24.75■■□□□ 1.55
EFCC1Q9HA90 TERF1P5-201ENST00000477545 1207 ntBASIC24.75■■□□□ 1.55
EFCC1Q9HA90 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 AC083880.1-201ENST00000608266 535 ntBASIC24.75■■□□□ 1.55
EFCC1Q9HA90 OR10C1-204ENST00000622521 1039 ntBASIC24.75■■□□□ 1.55
EFCC1Q9HA90 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
EFCC1Q9HA90 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
EFCC1Q9HA90 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC24.74■■□□□ 1.55
EFCC1Q9HA90 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
EFCC1Q9HA90 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.74■■□□□ 1.55
EFCC1Q9HA90 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.74■■□□□ 1.55
EFCC1Q9HA90 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.74■■□□□ 1.55
EFCC1Q9HA90 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
EFCC1Q9HA90 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.73■■□□□ 1.55
EFCC1Q9HA90 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 UNC93B4-201ENST00000505679 747 ntBASIC24.73■■□□□ 1.55
EFCC1Q9HA90 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.73■■□□□ 1.55
EFCC1Q9HA90 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
EFCC1Q9HA90 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
EFCC1Q9HA90 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.72■■□□□ 1.55
EFCC1Q9HA90 AC097658.1-201ENST00000475555 843 ntBASIC24.72■■□□□ 1.55
EFCC1Q9HA90 MMAB-206ENST00000540016 945 ntTSL 3 BASIC24.72■■□□□ 1.55
EFCC1Q9HA90 AC008694.1-202ENST00000636953 945 ntBASIC24.72■■□□□ 1.55
EFCC1Q9HA90 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
EFCC1Q9HA90 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.72■■□□□ 1.55
EFCC1Q9HA90 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.71■■□□□ 1.55
EFCC1Q9HA90 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.71■■□□□ 1.55
EFCC1Q9HA90 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.71■■□□□ 1.55
EFCC1Q9HA90 AC138907.5-202ENST00000569484 235 ntBASIC24.71■■□□□ 1.55
EFCC1Q9HA90 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.71■■□□□ 1.55
EFCC1Q9HA90 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
EFCC1Q9HA90 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.71■■□□□ 1.55
EFCC1Q9HA90 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
EFCC1Q9HA90 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.71■■□□□ 1.55
EFCC1Q9HA90 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms