Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 OXCT2P1-201ENST00000447263 1535 ntBASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 SLC25A24-204ENST00000569674 2357 ntBASIC18.73■□□□□ 0.59
COMMD4Q9H0A8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD4Q9H0A8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 AC006455.2-201ENST00000429931 906 ntBASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD4Q9H0A8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
COMMD4Q9H0A8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
COMMD4Q9H0A8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 AL034346.1-201ENST00000568244 1277 ntBASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COMMD4Q9H0A8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 OR2I1P-207ENST00000453522 948 ntBASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 AC010141.3-201ENST00000456659 717 ntBASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 UNC93B8-201ENST00000511903 705 ntBASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 AC099791.2-201ENST00000605725 427 ntBASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.68■□□□□ 0.58
COMMD4Q9H0A8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms